| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5412 |
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| Symbol | |
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| ID | 6309803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 5790211 |
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| End bp | 5790957 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642654094 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_001928039 |
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| Protein GI | 188584594 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAGA CTGCCCTCGA CGACATCGCC TTGCCTCTCG AGGACGAGGC GCCGACGCTC
CCTCCCGACG TTCAGCAACG CCTCGGAGCC CTTCTCGCCG AAGCCTACGC GCAGATGCCG
GGCAGCCCGA ACGCCGAAGC CGGCCGCTTC GACGCTCTGC TTGCACGGCT GGAGACCGTT
CTCGTCGCCC AGGAGGGAAA GGACGAGGAG ACGTTCCGGG CGGCCATCAT CGAGATGACG
CCGCGCCTCT ACAATTTCGC GATGTCGCTG ACCAAGAACC CTTCGGCCGC CGACGACCTC
GTGCAGGACA CGTTCCTGCG GGCTTGGCGC AGCCGTTCGC GCTTCACGGT CGGCACCAAT
CTGGGCGCTT GGCTGTTCAC GATCATGCGC AATGCCTTCT ACTCGCGCCA CCGCAAGGAG
GTACGCGAGG TGGCCGACAG CGACGGCGAT TACGCCGAGC GCCTTGCCGC CGCCCCCGAG
CAATCGGGCC ATGTCGATCT GATGGATGCG CAGACGGCAC TGGCCAAGCT GCCGCTGCCG
ATGCGGCAGG CCTTGATCCT CGTGGCGATC GAGAACCTCA GCTACGAGGA AGCGGCCACC
GTCATGAACT GCCGCATCGG CACGGTGAAG AGCCGGGTCT GGCGCGCCCG GGAACAGCTC
GCGCAGATCC TCGGCTACAG CGCCGCCGAT GTCGGCTCCG ACGGCATGAC GCTCTCGGCC
GTCGGCGGCT CGACCTGGAT GGCTTAG
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| Protein sequence | MPKTALDDIA LPLEDEAPTL PPDVQQRLGA LLAEAYAQMP GSPNAEAGRF DALLARLETV
LVAQEGKDEE TFRAAIIEMT PRLYNFAMSL TKNPSAADDL VQDTFLRAWR SRSRFTVGTN
LGAWLFTIMR NAFYSRHRKE VREVADSDGD YAERLAAAPE QSGHVDLMDA QTALAKLPLP
MRQALILVAI ENLSYEEAAT VMNCRIGTVK SRVWRAREQL AQILGYSAAD VGSDGMTLSA
VGGSTWMA
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