| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5401 |
|---|
| Symbol | |
|---|
| ID | 6313949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 5778022 |
|---|
| End bp | 5778525 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642654083 |
|---|
| Product | protein of unknown function DUF892 |
|---|
| Protein accession | YP_001928028 |
|---|
| Protein GI | 188584583 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3685] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.949113 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTTGT TCACGAAGGA CATCAAGTCG TTGGACGACC TCTTCGTGCA CACGTTGCAG
GATATTTATT ACGCCGAGAA CCAGATCACC AAGGCGCTTC CGACGATGAT CGGAAAAGCG
ACGAATGCGG GCCTGCGCCA AGGCTTCGAG ACGCATCTGC GCGAGACGGA AGGGCAGATC
AAACGCCTGG AGCAGGTGTT CGAGATGCAC GGTCACAAGC CGAAGGCGGT CAACTGCCCC
GCCATCGACG GCATCATCAA GGAAGCCAAT GAGACCGCGG GCGAAGTCGC CGACAAGGAG
GTGCTCGACG CCGCCCTGCT CGCAGCGGCG CAGGCGGTCG AGCACTACGA GATCGCCCGC
TACGGCACCC TCGTCGCCTG GGCCAAGCGG CTCGGACGCG ACGATTGCGC CGCACTGCTT
CAGCAGACGC TCGACGAGGA GAAGGCGACG GACCAGAAGC TCACGGCACT GGCCGAGAGC
CGGGTGAACC AGAAGGCGGC CTGA
|
|---|
| Protein sequence | MGLFTKDIKS LDDLFVHTLQ DIYYAENQIT KALPTMIGKA TNAGLRQGFE THLRETEGQI
KRLEQVFEMH GHKPKAVNCP AIDGIIKEAN ETAGEVADKE VLDAALLAAA QAVEHYEIAR
YGTLVAWAKR LGRDDCAALL QQTLDEEKAT DQKLTALAES RVNQKAA
|
|---|
| |