| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5394 |
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| Symbol | |
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| ID | 6310107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 5769547 |
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| End bp | 5770476 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 642654075 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001928021 |
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| Protein GI | 188584576 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.396186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTCT CGCGCCCCTT GAGAATCGGA ACCCGTGGCA GCCCGATGGC GCTCGCCCAG
ACCGGCATGG TCCGCGACCG GATCGTCGCG GCGAATCCGG GACTGGAGAC GGAGATCGTC
GTCGTCTCGA CCGTGGCCGA CCGGGTGCTC GACCGGCCGC TCTCCGAGAT CGGCGGCAAG
GGCCTGTTCA CGAAGGAGCT GGAACAGGCC CTGTTCGCCG ACACGATCGA CGTGGCCGTC
CACTCCATGA AGGACGTGGA GACCTGGCTG CCCGACGGAC TCGCCATCGC CTGCATCCTG
GAGCGGGACG ACCCGCGCGA CGCCTTTCTC AGCGCGGGTA CCGCGAACGG CCTCGCCGAT
CTGCCGTCCG GGGCTCGGGT CGGCACTTCC TCGCTGCGGC GGGGGGCGCA GGTGCTGATG
CATCGGCCCG ATCTCATGAT CGTCCCCCTG CGCGGCAACG CCAACACCCG CATGCGCAAG
CTGGAAGCGG GCGAATGCGA TGCCACGCTG CTGGCGCTCG CGGGACTGCA GCGGCTCGGC
ATGGAGGATG TCGCGCGCAG CGTGCTTCCA GTGGAGGAGA TGCTCCCCGC CGTCGCGCAG
GGCGCGCTCG GCATCGAGTG CCGGGCGGGC GACGACGCGA TCCGGGCGCT GCTGGCCCCG
GTCGCCTGCG CCACGACGAC GACGGCCCTC GACGCCGAGC GCGGCCTTCT CGCCGAACTC
GACGGCTCCT GCCGCACGCC GATCGCCGCC CTCGCGCAGG TGAACGGCGA CCGCATCGCC
CTCGACGGCC TGCTGTTCCT GCCCGACGGC AGCCGCCACT GGGCCGTGCA TCGCGAGGGG
CCGGCGGCGG AAGCCGACGC GATCGGCCGC GATGCCGGAG CCGAATTGAA GCGGTCGGCG
GGCGACGTCT ACTTCGCCCA CCTCAAATAG
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| Protein sequence | MSLSRPLRIG TRGSPMALAQ TGMVRDRIVA ANPGLETEIV VVSTVADRVL DRPLSEIGGK
GLFTKELEQA LFADTIDVAV HSMKDVETWL PDGLAIACIL ERDDPRDAFL SAGTANGLAD
LPSGARVGTS SLRRGAQVLM HRPDLMIVPL RGNANTRMRK LEAGECDATL LALAGLQRLG
MEDVARSVLP VEEMLPAVAQ GALGIECRAG DDAIRALLAP VACATTTTAL DAERGLLAEL
DGSCRTPIAA LAQVNGDRIA LDGLLFLPDG SRHWAVHREG PAAEADAIGR DAGAELKRSA
GDVYFAHLK
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