Gene Mpop_5379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_5379 
Symbol 
ID6313055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5754916 
End bp5755464 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content65% 
IMG OID642654060 
ProductHNH endonuclease 
Protein accessionYP_001928006 
Protein GI188584561 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.785631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.574785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATC TTCAGACCCT GGTGCTCAAC GCGGATTACC GGCCGCTTTC CTACAATCCG 
CTGTCGTTGT GGTCCTGGAA GGACGCGTTC ACGGCCCTGT TTCTCGATCG CGTCACCCTG
GTCGCCAATT ACGATATCGA GGCGCACAGC CCCAGCCGGT CCCTCAAGGT GCCGAGCGTG
GTCGCCCTCA AGAGCTATGT GGCGCTGGCG CGCAGCCCGG CCTTCACCCG CTACAACATC
TACCTGCGCG ACACCTTCAC CTGCCAGTAT TGCGGCCTGC GTCTCCCCTC CGGCGGCCTG
ACCTTCGACC ACGTCGTGCC CCGCTCCCGC GGTGGTCTCT CCACCTGGGA GAACGTCGTG
GCGGCCTGCT CACCCTGCAA CCTGCGCAAG GCCAACCGCA CCCCCGACGA GGCGGAGATG
CCCCTCCTCA ACGAGCCGCA CCGGCCGACG CGCCACGAAC TGCACCGCCG CCAGCCGGAA
TTCGACCACC GCCAGTATCA CCACACCTGG CTCGACTATC TCTACTGGGA CAGCGAACTC
GACAGCTGA
 
Protein sequence
MIDLQTLVLN ADYRPLSYNP LSLWSWKDAF TALFLDRVTL VANYDIEAHS PSRSLKVPSV 
VALKSYVALA RSPAFTRYNI YLRDTFTCQY CGLRLPSGGL TFDHVVPRSR GGLSTWENVV
AACSPCNLRK ANRTPDEAEM PLLNEPHRPT RHELHRRQPE FDHRQYHHTW LDYLYWDSEL
DS