| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5378 |
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| Symbol | |
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| ID | 6312961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 5751448 |
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| End bp | 5754177 |
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| Gene Length | 2730 bp |
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| Protein Length | 909 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642654059 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_001928005 |
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| Protein GI | 188584560 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.287309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.723398 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACGAG ACGTACTCCT CACCCGTTTC CGCCACGTCG TTCGCGGCGC CGCGCTGGTC
GCGGCGCTCA CCGCGACGAG TGTGCTGCCG AATGCGGCGG CGGGGCAGGG GAGTCCGCCG
GCAGCCCCGG CTGCGCAAGC GCCGACTGCG AAGCCGGACG CGGCCCCACC GGCGGCGAAC
GGGCAGGCCG CGCCGGCCGC CAAGCCGGCA GCGCCGAAGG CGCCGGTCTC GGAGGCGCTG
CAAACCCTCC GTGACCGCCT CGATACCATC AAGGCGGATC TCGAAGCGCG GGAGAAGGCG
ATCACCGGGC CCAATGTCGG CGCGGGCGAC CTGACCCGCG CCCGCGACGG GCTCGATCCC
GTTGCCGACC GGCTGCGGTC GGTGATCGAG TTGCTCGGCC CTCGGCTGGA TGCGGCGCGC
GAGCGCCTGA CACAGATCGG GCCGAAGCCG AAGGAGGGCG AGGAGAGCGA GGAGGTCGCC
CGCGAGCGCG CGGAGCGCGA GCAGGCGGTC AACGACATCG ACGGCACCCA GCGGCTGGCC
AAGTCGCTGC TGGTTCAGAG CGACCAGATC GTCGACCAGA TCTCGAATCG ACGCCGCGCC
GCCTTCACCC GCGGCCTGTT CGAGCGCAGC ACCTCGCTGC TGAGCCCGGA CCTTTGGATG
CGGGTCGGCG CCGACATCCC GCGGGATCTC AGCTCCCTGA GGAGCGGCTT CGACGACACG
GTCTCGCTGT TTCGCCGCAA CGGCAGCCTG TGGAACCTGT TGGTGCTCGG CCTCGCCTTC
GGCCTGTCCT TCGCCCTGTA TTTCGGACGC CGCAACATCG CTCCCGCGCT CGGGCGCCGG
GATATCAACG TCACCTCGCC GTCGAAGCGT GCCAAGCTCC TGGGTGCGTG GCGGGTGCTC
CTGCTCGGAA CGCTGCCGGC CCTGGCGGGC AGCTACGCGG TCTACTACGC CCTCGACGTC
ACCGAACTGC TGCCCGCCCG CTTCCTGCCG GTGGCCAGCA CCATCCTCGG CGGCATCGCC
TTCATCGCCT TCGTCGAGGC GACCGGCGAC GCGCTGCTCG CGGTCAACAA GCCGGCTTGG
CGCCCCGCAC CGGTCTCGGA CGCCGCCGCG TGGCGGATCA ACGCGCTTGC CGTCAGCATC
GCCGTCGTCA TCACGGTGTC AAAATCCACC GAGGCACTGA ACTCGGCGAT CTACGCCGCG
CTGCCGATCT CGATCGCGAC CCGGGGCGTC GGCGCCGTGA CGGCGGCCTT GCTGCTCGCC
ATCGGCCTCC ACCGCTTCGC CGACACGGCG GAAAAGGAGG AGGAGTGCTT CGGCCCCTAT
GTCGGAACCG AGACCTCGTC CAATATCGGC GGGCCGCTGC GGCTGCTCGG CTGGGTCGCG
GTCGCCGTGA TCGCGGTGGC ACCGCTCATC GGCTACGTCG CCCTCTCGGC CTTCCTCGTC
GATCAGCTGA TCTGGACCGC GAGCATCCTC GTCCTGCTCT GGCTCCTGAT CGTCAGCGCC
GACGTGCTGA TCGGCGGCTC CCTGTGCGAA GACACCCGCA TCGCCACGAC GCTCCAGGCC
AATACCGGCC TGCGCAAGCG CTCGCTCAAC CAGATCGCGG TGCTGGCGAC GGGCTTCGCC
CGTGTCCTGC TGATCGCTGT CGCCGCGCTC CTGGCGCTCG CGCCCTGGGG GCTCGATTCG
ACGGACATCT TCTCGTCGGT CCGCACGGCC TTCTTCGGCT TCAAGGTCGG CGACGTCACG
ATCTCGCTCT CGGCGATCGC CTTCGGCGTC AGCATCCTCG TGCTCGGGGT GTTCATCACC
CGCGGGATCC AGCGCTGGCT GGAGAACACA TACCTGCCGG CAACCGATCT CGATGCGGGC
CTGCGCAACT CGATCTCGAC GGTGGCCGGC TATGTCGGCT TCCTCCTCGC CCTGGCGCTC
GCCTTCTCGT ATCTGGGCCT GAGCCTGGAG AAGCTGACCA TCGTCGCCGG TGCGCTCTCG
GTCGGTATCG GTTTCGGCCT CCAGTCGATC GTCAACAACT TCGTCTCGGG CCTGCTGCTG
CTGTGGGAGC GTCCGATCCG CGTCGGCGAT CAGGTTCTGA TCGGCGACAG CGAGGGCATC
GTGAAGCGCA TCTCCGTGCG CTCCACCGAG ATCCAGACCT TCGACCGCTC GGCGGTCATC
GTCCCGAACT CGAACCTGAT CTCAGGGATC GTGAAGAACC GCGTGCGCGG CGACCGCACG
GGCCGGGTCA TCATCTCGGT CAACGTGCTG CGCAGCAAGG ATCCGGTACA GGCGGCCGAG
ATGATGGTCG CCTGCGCCAA GGCCCATCCC GACGTGCTCA AGGAGCCGCC GCCGCGGGTG
GTGTTCAAGA AGATCGGCGA CCCCTTCCTC GAGTTCGAGC TGGTCGCCAT GGTGATCGAC
GTCAATCTCG GCCAGAAGGT GCAGAGCGAC CTGAACTTCT CGGTGTTCAA GACCCTGGCC
GATGCCGAGT TCATCCCGCC GATGGGGCCG GCTTCGAGCT TCATCACCGT GCAGGGCCTG
GAGCCGGTGC GCGATGCGCT CGGACAGATC GCTTACGCGG TCGGCCAGTC GGGAACACAG
ATCGTCGCGC CGGCGGCCGC CTCGGGATCG AACAGCGAGG AGAAGAAGCC GGAGATGGCG
GAGGAGGCCG CGTCGTCCTC CACCCCACGC GAGGAATTGC GCCGGGCCCC GGGGGCCTCG
CAGGAGGCAG CTCGCCGGCG CCTGGGATAG
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| Protein sequence | MLRDVLLTRF RHVVRGAALV AALTATSVLP NAAAGQGSPP AAPAAQAPTA KPDAAPPAAN
GQAAPAAKPA APKAPVSEAL QTLRDRLDTI KADLEAREKA ITGPNVGAGD LTRARDGLDP
VADRLRSVIE LLGPRLDAAR ERLTQIGPKP KEGEESEEVA RERAEREQAV NDIDGTQRLA
KSLLVQSDQI VDQISNRRRA AFTRGLFERS TSLLSPDLWM RVGADIPRDL SSLRSGFDDT
VSLFRRNGSL WNLLVLGLAF GLSFALYFGR RNIAPALGRR DINVTSPSKR AKLLGAWRVL
LLGTLPALAG SYAVYYALDV TELLPARFLP VASTILGGIA FIAFVEATGD ALLAVNKPAW
RPAPVSDAAA WRINALAVSI AVVITVSKST EALNSAIYAA LPISIATRGV GAVTAALLLA
IGLHRFADTA EKEEECFGPY VGTETSSNIG GPLRLLGWVA VAVIAVAPLI GYVALSAFLV
DQLIWTASIL VLLWLLIVSA DVLIGGSLCE DTRIATTLQA NTGLRKRSLN QIAVLATGFA
RVLLIAVAAL LALAPWGLDS TDIFSSVRTA FFGFKVGDVT ISLSAIAFGV SILVLGVFIT
RGIQRWLENT YLPATDLDAG LRNSISTVAG YVGFLLALAL AFSYLGLSLE KLTIVAGALS
VGIGFGLQSI VNNFVSGLLL LWERPIRVGD QVLIGDSEGI VKRISVRSTE IQTFDRSAVI
VPNSNLISGI VKNRVRGDRT GRVIISVNVL RSKDPVQAAE MMVACAKAHP DVLKEPPPRV
VFKKIGDPFL EFELVAMVID VNLGQKVQSD LNFSVFKTLA DAEFIPPMGP ASSFITVQGL
EPVRDALGQI AYAVGQSGTQ IVAPAAASGS NSEEKKPEMA EEAASSSTPR EELRRAPGAS
QEAARRRLG
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