| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5372 |
|---|
| Symbol | |
|---|
| ID | 6312955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 5745565 |
|---|
| End bp | 5746296 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642654053 |
|---|
| Product | 6-phosphogluconolactonase |
|---|
| Protein accession | YP_001927999 |
|---|
| Protein GI | 188584554 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase |
|---|
| TIGRFAM ID | [TIGR01198] 6-phosphogluconolactonase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.364101 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATTCCGC TTCCCCCCAA CACCGAATTG ACGGCGGATG CCGAGGCGAC GGCCCGGGCG
GCGGCCGAGC ATCTTCTGAC GATCGCCGGA AGCGCGCCGG GGGATCGTGT CGCGATCTGC
CTGTCCGGCG GCTCGACGCC GAAGCGGCTC TACGCGCTGC TGGCGTCGCC CGGCTTCGTC
GAGCGGGTGC CGTGGGCGCG CATCCACTGG TTCTTCGGCG ACGACCGGGT CGTGCCGTGG
GACGATCCCT TGAGCAACGT GCGGATGGTG CGCGAGGCCT TCGGCCATGC CGCACCGGTG
CCGGCGACGC ACCTGCACTT CATCCCCTCC GACAAAGGCG CCGAAGCCGG GGCCCGGGCC
TATGAGCGGG TGCTGCAGGA TTTCTACGGC GCCGACCGGC TCGACCCGAA CCGGCCGCTC
TTCGACCTCG TGCTGCTGGG CCTCGGCAGC GATGGGCACA CGGCCTCGCT GTTCCCGGGC
AAGCCGGCGC TCGCCGAGCG CGAGGCCTGG GTCGCGCCGG TGCCGGAGGC GGGGATGGAG
CCGTTCGTGC CGCGCATCAC CCTGACCTTC CCGGCCTTGG CCTCCTCCCG CTCGGTGCTG
TTCCTCGTCA ACGGCGCGGG CAAGCGGGAG CCGCTGCAGC GACTCGCCAA TGGCGAGGAT
CTGCCGGCGC GGCACGTCGA GAGTGCGGGG CGGGTGACGT GGTACGTCGA TCGCGAGGCA
GCTGCGGCCT GA
|
|---|
| Protein sequence | MIPLPPNTEL TADAEATARA AAEHLLTIAG SAPGDRVAIC LSGGSTPKRL YALLASPGFV
ERVPWARIHW FFGDDRVVPW DDPLSNVRMV REAFGHAAPV PATHLHFIPS DKGAEAGARA
YERVLQDFYG ADRLDPNRPL FDLVLLGLGS DGHTASLFPG KPALAEREAW VAPVPEAGME
PFVPRITLTF PALASSRSVL FLVNGAGKRE PLQRLANGED LPARHVESAG RVTWYVDREA
AAA
|
|---|
| |