Gene Mpop_5368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_5368 
Symbol 
ID6313748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5741954 
End bp5742451 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content69% 
IMG OID642654049 
ProductTspO and MBR like protein 
Protein accessionYP_001927995 
Protein GI188584550 
COG category[T] Signal transduction mechanisms 
COG ID[COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.468855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.642403 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGCG TGCTGGCCGG CGGCTGGGAG CCGCCCGTCC TGGCCGCCCT GCTGGCGCTC 
GTGGTCGCCG TGGCCGGCGG GGTCGCGACC CGGACCGACG CTTGGTATCA TCGCCTGCGC
GTGCCCGGAT GGAAGCCGCC GGACTGGGCC TTCGGTCCGG TCTGGACCGT CATCTTCATC
CTCACCACGG CCTCGGCGAT CATCGCATGG AACGCAGATT CCGATCCGGC GGCGCGAACC
CGGCTGGTTG CGGTCTTTGC CGTCAACGGC GTGCTCAACA TCGCCTGGAG CGTGATCTTC
TTCCGCCTGC GCCGTCCCGA CTGGGCTTTC GCGGAGGTGT TGCTGCTGTG GTTCTCCATC
CTCGCGGTGG TGTTCACCCT CGGCCGGGTG TCCGTGGCGG CGGCGCTGCT CAACCTTCCC
TATCTCGCCT GGGTGAGCGT CGCCGCCTAC CTGAACCGTA CCATCGTCCG GCTCAATCCG
CGCTTCGGGG GCGCGTGA
 
Protein sequence
MTGVLAGGWE PPVLAALLAL VVAVAGGVAT RTDAWYHRLR VPGWKPPDWA FGPVWTVIFI 
LTTASAIIAW NADSDPAART RLVAVFAVNG VLNIAWSVIF FRLRRPDWAF AEVLLLWFSI
LAVVFTLGRV SVAAALLNLP YLAWVSVAAY LNRTIVRLNP RFGGA