Gene Mpop_5349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_5349 
Symbol 
ID6313312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5720164 
End bp5721381 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content68% 
IMG OID642654030 
Product5-aminolevulinate synthase 
Protein accessionYP_001927976 
Protein GI188584531 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01821] 5-aminolevulinic acid synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTACG AAGCGTTCTT CGGCAGCGCG CTCACCGGGC TCCATCGGGA GGGGCGCTAC 
CGCGTCTTCA CCGATCTGGA GCGGCAGGCC GGCCGCTTTC CCTACGCGAC GCACCACAGC
CCCGGTGGCG TGCGCGAGGT CACCGTCTGG TGCTCCAACG ACTATCTCGG CATGGGCCAG
CACCCCTCCG TGCTGCGGGC GATGCACGAG GCGATCGACC GCTGCGGTGC CGGGGCGGGC
GGCACCCGCA ACATCTCCGG CACCAACCAT TACCACGTGC TCCTGGAGCA GGAACTCGCC
GACCTCCACG AAAAGGAGGC AGCGCTGATC TTCTCCTCCG GCTACGTCTC GAACTGGGCC
GCGCTCGGTA CGCTCGCCTC CAAGCTCCCG GGCTGCGTCG TCTTCTCCGA CGAGGGCAAC
CACGCCTCGA TGATCGAGGG CATCCGTTCG AGCCGGGCCG AGCGCCAGAT CTTCCGCCAC
AACGATCCGG AGGATCTGAA CCGCAAACTC GGCCTGATCG AGCCCGGCCG GGCCAAGCTC
GTCGCCTTCG AGTCGGTCTA TTCCATGGAC GGCGACATCG CGCCGATCGA CGAGATCTGC
GACGTGGCCG AAGCCCACGG GGCGCTGACC TACCTCGACG AGGTGCATGC GGTCGGGCTC
TACGGCGCGC GGGGCGGCGG CATCTCCGAG CGCATGGGGA TCGCGCACCG GCTCGACGTG
ATCGAGGGGA CGCTCGGCAA GGCCTTTGCC GTCCATGGCG GCTACATCAC GGGCTCGGAG
CAGCTCTGCG ACTTCGTGCG CAGCTTCGCC TCGGGCTTCA TCTTCACCAC CTCGCTACCG
CCGGCCGTCG CGGCGGGCGC GGCGGCGAGC ATCCGCCATC TCAAGGCGAG CAGCGCCGAG
CGCGCGCGCC ATCAGGAGCG TGTGGCCCGC GTGCGGCAGG CGCTGGATGC GGCGGCCATT
CCAACGCTCG CCAACCACAG CCATATCGTG CCGGTGATGG TGTGCGATCC CGTGCTGTGC
AAGGCGATCA GCGACTCGCT TCTCGACGAG TTCGGGATCT ACGTGCAGCC GATCAACTAT
CCCACGGTGC CGCGGGGGAC GGAGCGTTTG CGCATCACGC CCTCGCCGCT GCATTCCAAC
GCTGATATCG ACCACCTCGT GGACGCCCTG AGCACGATCT GGCGGAGGAT CGGTCTGAGC
AAGGCCGCGG CGGAGTAG
 
Protein sequence
MDYEAFFGSA LTGLHREGRY RVFTDLERQA GRFPYATHHS PGGVREVTVW CSNDYLGMGQ 
HPSVLRAMHE AIDRCGAGAG GTRNISGTNH YHVLLEQELA DLHEKEAALI FSSGYVSNWA
ALGTLASKLP GCVVFSDEGN HASMIEGIRS SRAERQIFRH NDPEDLNRKL GLIEPGRAKL
VAFESVYSMD GDIAPIDEIC DVAEAHGALT YLDEVHAVGL YGARGGGISE RMGIAHRLDV
IEGTLGKAFA VHGGYITGSE QLCDFVRSFA SGFIFTTSLP PAVAAGAAAS IRHLKASSAE
RARHQERVAR VRQALDAAAI PTLANHSHIV PVMVCDPVLC KAISDSLLDE FGIYVQPINY
PTVPRGTERL RITPSPLHSN ADIDHLVDAL STIWRRIGLS KAAAE