Gene Mpop_5342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_5342 
Symbol 
ID6309561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5713432 
End bp5714127 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content73% 
IMG OID642654024 
Productheat shock protein DnaJ domain protein 
Protein accessionYP_001927970 
Protein GI188584525 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCTCG CCCTCGGCCT TCTGGCGCTC CTCGGATTCT GGTGGCTCGG CCGCCGCAAC 
GGGCGCCTGC CCTTCGGCCT GACGCCCCGG TTGCTCGGCG GCTACGCCCT TCTGGCAATG
GCCTTCGTGC TGTCGCTGCG CGGCAGCTTC ATCCCTGCCC TTCTGCTCGG CGCGGGAGGG
GTATGGCTGA CGGAGGGCGA GGCGGGCGTG ATCCGGCGCG TGCGCGCGTG GCGCGGGCAG
CGGGCGCCGC AACTCGTGCG GACGGCCTCC CTCGAACTCG ACATCCGCCC CGACGGCATC
CCGCTGGACG GCACGCTCTT CGTCGGGCCC TTCGCGGGGC GCCGCCTGTC GGCGGTGCCG
CCGGAGGCAT TGGTCGAACT GACCGCGCTT CTGCGCACCA ACGATCCCGA GGGCGCGCGG
CTGCTAGAGG CGTATCTCGA CCGCCGGCAG CCCGGCTGGC GTGTAGACGC TGATGGCGAT
GGAGACCCGC GGCCGGGCGG CGCGGCGAAG CCAGGGACGA TGACGGAGGA GGAGGCTTAT
CAGGTCCTGG GGCTTGAGCG CGGGGCGTCC CTGGAGGACG TCCGCGCGGC TCATCGGGCG
CTGATGAAGC GGCTGCATCC CGACCAGGGC GGCAGCGTCG AGCGGGCGGC GCGCGTGAAC
GCGGCGCGTG ACAGGCTGGT GAACCGACAT CGCTAG
 
Protein sequence
MLLALGLLAL LGFWWLGRRN GRLPFGLTPR LLGGYALLAM AFVLSLRGSF IPALLLGAGG 
VWLTEGEAGV IRRVRAWRGQ RAPQLVRTAS LELDIRPDGI PLDGTLFVGP FAGRRLSAVP
PEALVELTAL LRTNDPEGAR LLEAYLDRRQ PGWRVDADGD GDPRPGGAAK PGTMTEEEAY
QVLGLERGAS LEDVRAAHRA LMKRLHPDQG GSVERAARVN AARDRLVNRH R