| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5335 |
|---|
| Symbol | glpD |
|---|
| ID | 6312984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 5704548 |
|---|
| End bp | 5706062 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642654017 |
|---|
| Product | glycerol-3-phosphate dehydrogenase |
|---|
| Protein accession | YP_001927963 |
|---|
| Protein GI | 188584518 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAGC CTTTCGATCT CCTCGTCATC GGCGGCGGCA TCAATGGTGT CGGCATCGCC
CGCGACACCG CCGGCCGCGG ACTGCGTGTG CTCCTGTGCG AGCGGGGAGA TCTGGCCGAA
CACACCTCGT CGGCTTCGAC GAAGTTGATC CATGGCGGCC TGCGCTACCT CGAACATTAC
GAGTTCCGGC TCGTGCGCGA GGCGCTGGCC GAGCGCGAGC GACTGATGCG GCTCGCGCCG
CACATCATCT GGCCGCTGCG CTTCGTCCTG CCGCACGATG CCGGTCTGCG TCCGGCCTGG
ATGCTGCGGA TCGGGCTGTT CCTCTACGAC CATCTCGCGC GGCTGAAGGC CTTGCCGCGG
TCGGACGCGC TGCGGCTCAC CCGCGAGGGC GTCGGTGCGC CGCTTCAGAG CCGGCTCACG
CGGGGCTTCG CCTATTCCGA TTGCTGGGTC GAGGACAGCC GCCTCGTCGT GCTGAACGCG
GTGGATGCCG CCGAGCGCGG CGCGCAGATC CGCACCCGCA CCACCGTCGA ATCGGCCCGC
CGCGAGGCCG GAGGCTGGAC CGTGACCCTC CACGATGCCG CCACGCGGCG GCGGGAGAGC
GTCCGCGCGC GGATCGTCGT CAACGCGGCC GGGCCTTGGG TCGGCGAGAC GCTGCTGCGC
ACGCTCCGTG TCGAGGCCCG CCCGAAGGTG CGCCTCGTCA AGGGCAGCCA CATCGTCGTG
CGGCGGCTCT ACGAGGGCGA CCAGGCCTAT ATCCTGCAGC AGCCGGACCG CCGCATCGTC
TTCGCCATCC CCTACGAGCG CGACTTCACC CTGATCGGCA CCACCGACGT GGCGCATGAG
GGCGGCCCCG GCCCGGTCCG CATCTCGCAG GAGGAGACGC GCTATCTCTG CGCCTGCATC
AACCGCTCGT TCGCGCGGTC GATCGGACCC GACGACGTGG TGTGGAGCTT CTCGGGGCTG
CGCCCGCTCT ACGACGATGC GGCCGCGAAT GCCTCCGCGG TGACCCGCGA CTACGTGCTC
GACCTCGACA CCGATGGTCC GCCGGTCCTC TCGGTGTTCG GCGGCAAGAT CACGACCTAC
CGGCGGCTCG CCGAGCACGC GCTGGAGAGG CTGCGGCCAC ACCTGTCCGG CCTGAAGCCC
GGCTGGACCG GACAGGCGCC CCTGCCCGGC GGCGACATGC AGGATGCGGA CTTCGACCGG
TTCGCGGAGC GGCTCGCGGC CGAGCACCCC TTCCTCCCGA ACGCGACGGC CCGCCGGCTC
GCCCGCGCCT ACGGGACCCG CGCGGAACGC CTGCTCGGCG ACGCGCGGGC CCTGTCGGAC
CTCGGCGAAA CCTTCGGTGG CGATCTCAGC GCCCGCGAGG TTGATTATCT CGCGCGGCAC
GAATGGGCGC GCACGCCCGA CGACATCCTC TGGCGCCGCT CGAAGCTCGG CCTGAGGACG
GGCCGTACGG ATGTGGCCCG GCTCGGGCGC TATCTTGCGA CCGCGTCGGC CGCCCCGAGC
GCTCAGCGGC CGTAG
|
|---|
| Protein sequence | MSEPFDLLVI GGGINGVGIA RDTAGRGLRV LLCERGDLAE HTSSASTKLI HGGLRYLEHY
EFRLVREALA ERERLMRLAP HIIWPLRFVL PHDAGLRPAW MLRIGLFLYD HLARLKALPR
SDALRLTREG VGAPLQSRLT RGFAYSDCWV EDSRLVVLNA VDAAERGAQI RTRTTVESAR
REAGGWTVTL HDAATRRRES VRARIVVNAA GPWVGETLLR TLRVEARPKV RLVKGSHIVV
RRLYEGDQAY ILQQPDRRIV FAIPYERDFT LIGTTDVAHE GGPGPVRISQ EETRYLCACI
NRSFARSIGP DDVVWSFSGL RPLYDDAAAN ASAVTRDYVL DLDTDGPPVL SVFGGKITTY
RRLAEHALER LRPHLSGLKP GWTGQAPLPG GDMQDADFDR FAERLAAEHP FLPNATARRL
ARAYGTRAER LLGDARALSD LGETFGGDLS AREVDYLARH EWARTPDDIL WRRSKLGLRT
GRTDVARLGR YLATASAAPS AQRP
|
|---|
| |