Gene Mpop_5325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_5325 
Symbol 
ID6309210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5694635 
End bp5696275 
Gene Length1641 bp 
Protein Length546 aa 
Translation table11 
GC content67% 
IMG OID642654007 
Productchaperonin GroEL 
Protein accessionYP_001927953 
Protein GI188584508 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0459] Chaperonin GroEL (HSP60 family) 
TIGRFAM ID[TIGR02348] chaperonin GroL 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.589591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCGA AAGACGTTCG TTTCTCCGCC GACGCTCGCG ACAAGATGCT GCGCGGCGTC 
GACATCCTCG CGGATGCCGT CAAGGTCACC CTCGGCCCGA AGGGCCGCAA CGTCGTCATC
GAGAAGAGCT TCGGCGCGCC CCGCATCACC AAGGACGGTG TGACGGTCGC CAAGGAGATC
GAGCTCGCCG ACAAGTTCGA GAACATGGGC GCCCAGATGG TGCGCGAAGT GGCCTCGAAG
ACCAACGACA TCGCCGGTGA CGGCACCACC ACCGCGACCG TGCTGGCCCA GGCCATCGTC
CGCGAGGGCG CCAAGTTCGT CGCCGCCGGC ATCAATCCGA TGGACCTGAA GCGCGGCATC
GACCTCGCCA CCCAGGCCGC CGTGAAGGAC ATCACCGCCC GCGCCAAGAA GGTCGCTTCC
TCCGAGGAAG TCGCCCAGGT CGGCACGATC TCCGCCAACG GCGACAAGGA GATCGGTGAG
ATGATCGCCC ACGCCATGCA GAAGGTGGGC AACGAGGGCG TCATCACCGT CGAGGAGGCC
AAGACCGCCG AGACCGAACT CGACGTCGTC GAGGGCATGC AGTTCGACCG CGGCTACCTC
TCCCCGTACT TCGTGACGAA CGCGGAGAAG ATGGTCGCCG AGCTCGAGGA TCCTTACATC
CTCATCCACG AGAAGAAGCT CTCCTCGCTG CAGCCGATGC TGCCGGTGCT CGAGGCCGTG
GTGCAGACCG GCAAGCCGCT GCTCATCATC GCCGAGGACA TCGAGGGCGA GGCGCTCGCG
ACCCTCGTCG TGAACAAGCT GCGCGGCGGC CTGAAGGTCG CGGCGGTGAA GGCTCCGGGC
TTCGGCGATC GCCGCAAGGC GATGCTCGAG GACATCGCGA TCCTCACCAA GGGCCAGACC
ATCTCCGAGG ATCTCGGCAT CAAGCTCGAG AACGTCGCCC TGCCGATGCT CGGCCGCGCC
AAGCGCGTCC GCATCGAGAA GGAGAACACC ACGATCATCG ACGGTCTCGG CGAGAAGGCC
GACATCGAGG CCCGCGTCGG CCAGATCAAG GCGCAGATCG AGGAGACCAC CTCGGACTAC
GACCGTGAGA AGCTCCAGGA GCGTCTGGCC AAGCTCGCGG GCGGCGTCGC GGTGATCCGC
GTCGGCGGCG CGACCGAGGT CGAGGTCAAG GAGAAGAAGG ACCGCGTGGA CGACGCGCTC
AACGCCACCC GCGCTGCGGT GGAAGAGGGC ATCGTCCCCG GCGGCGGCAC GGCTCTGCTC
CGCGCCAAGA AGGCGGTCGC CGAGCTGAAG TCCGACGTTC CGGACGTCCA GGCCGGCATC
AAGATCGTGC TCAAGGCGCT TGAGGCCCCG ATCCGCCAGA TCGCCCAGAA CGCGGGCGTC
GAGGGTTCGA TCGTCGTCGG CAAGATCACC GACAACACCG GCTCCGAGAC CTACGGCTTC
AACGCCCAGA CCGAAGAGTA CGTCGACATG ATCCAGTCGG GCATCGTCGA CCCGGCCAAG
GTCGTGCGCA CCGCCCTCCA GGACGCGGCC TCCGTCGCCG GCCTGCTGGT GACCACGGAA
GCCATGGTCG CCGACGCGCC GAAGAAGGAC AGCCCGGCCC CGGCGATGCC CGGCGGCGGC
ATGGGCGGCA TGGACTTCTA A
 
Protein sequence
MAAKDVRFSA DARDKMLRGV DILADAVKVT LGPKGRNVVI EKSFGAPRIT KDGVTVAKEI 
ELADKFENMG AQMVREVASK TNDIAGDGTT TATVLAQAIV REGAKFVAAG INPMDLKRGI
DLATQAAVKD ITARAKKVAS SEEVAQVGTI SANGDKEIGE MIAHAMQKVG NEGVITVEEA
KTAETELDVV EGMQFDRGYL SPYFVTNAEK MVAELEDPYI LIHEKKLSSL QPMLPVLEAV
VQTGKPLLII AEDIEGEALA TLVVNKLRGG LKVAAVKAPG FGDRRKAMLE DIAILTKGQT
ISEDLGIKLE NVALPMLGRA KRVRIEKENT TIIDGLGEKA DIEARVGQIK AQIEETTSDY
DREKLQERLA KLAGGVAVIR VGGATEVEVK EKKDRVDDAL NATRAAVEEG IVPGGGTALL
RAKKAVAELK SDVPDVQAGI KIVLKALEAP IRQIAQNAGV EGSIVVGKIT DNTGSETYGF
NAQTEEYVDM IQSGIVDPAK VVRTALQDAA SVAGLLVTTE AMVADAPKKD SPAPAMPGGG
MGGMDF