Gene Mpop_5316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_5316 
Symbol 
ID6309429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5685238 
End bp5686020 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content74% 
IMG OID642653998 
Productrestriction endonuclease 
Protein accessionYP_001927944 
Protein GI188584499 
COG category[V] Defense mechanisms 
COG ID[COG1787] Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.493703 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGCC GGTCGCCTAC CGTCACGCGT CTGTTCTGGA CCCTGGTCCT CGGGGGCGCC 
GCCGGTTTCC GCTACGGGGC CCCGGCCTTG GCCGCCACGG GGGCGGCCTG CCTCGCGATC
CTCCTTCACC GCCTCGACCG CCCGCGCCGG TTCCGCTCCC TCGTGCGCCG CATCGCCCGG
CGCCACGCGG CGACGCTGGC CCTGCGGCGA CGGCAGGAGC GCTTCCTCGA TGCCTATGGC
AACACGATCG AGGATGGCTG GCTGCGCGAG CGCGCGTATT TCGTCGAGCG TACCATCCTG
CCGCTCGTGG AGGCGCGCGG CTTTTCCGAC TACGTCGACC CGCGGTTCGA TCAGATGGAG
GCGATCGTCG AGCGGGTGGC CAGCGGCTAC GCCCTTCCCG ACGCGATCGA CACGCCGGAG
GATGGCGTCG CCTACGAGCG CTACTGCGCC GAGCTTCTGG GCGAAGCGGG CTGGGACGCC
CGGCCGACGG GAGCCAGCGG CGACCAGGGC TGCGACGTGA TCGCCGAGAA GGCGGGCGTG
CGGCTCGTCG TGCAGTGCAA GCGCTACGCC CGACCGGTCG GCAACGCGGC GGTGCAGGAG
GTGGCGGCGG CCGCCCTGCA CTGGTCCGGC GACATGGCGG CCGTCGTCTC GAATGCCGGC
TTCACGCCCG CCGCCCGCAA GCTCGCCGGC ACCACCGGCG TGCTCCTTCT GCACCACGAC
GACCTGTCGG GCCTCGCGCC CGTGCGGCGG GCCGGCCGCC GGATGGTGAC GGCCGGACGC
TGA
 
Protein sequence
MSGRSPTVTR LFWTLVLGGA AGFRYGAPAL AATGAACLAI LLHRLDRPRR FRSLVRRIAR 
RHAATLALRR RQERFLDAYG NTIEDGWLRE RAYFVERTIL PLVEARGFSD YVDPRFDQME
AIVERVASGY ALPDAIDTPE DGVAYERYCA ELLGEAGWDA RPTGASGDQG CDVIAEKAGV
RLVVQCKRYA RPVGNAAVQE VAAAALHWSG DMAAVVSNAG FTPAARKLAG TTGVLLLHHD
DLSGLAPVRR AGRRMVTAGR