Gene Mpop_5298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_5298 
Symbol 
ID6313456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5663435 
End bp5665471 
Gene Length2037 bp 
Protein Length678 aa 
Translation table11 
GC content72% 
IMG OID642653980 
ProductFusaric acid resistance protein conserved region 
Protein accessionYP_001927926 
Protein GI188584481 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.812245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGGG CGGCGCAGCC GGCGGGCCGG GCGGGGCTCG GCGAGCGCCT GCTCGATGCC 
CTGGACCGCT GGGTGCCGAA GCCCGCCGCC TGGGCCTTTG CCCTGCGGAT CTGGCTCGCC
ATGATGCTGG CGCTCTACAC TGCGTTCTGG CTCCAGCTCG ACAGTGCTTC CTCGGCGGCG
GTCTGCGTCG CGATCCTCGC CCAGCCCAAG CGCGGCCAAG CCCTGTCGAA GGCCGGATAC
CGCTTCCTCG GCACGGTGAT CGGCGGCATC GTCGGCATCC TGCTGATCGC GCTGTTCGGA
CAGGACCGGG TGCTCCTCCT CGTCAGCTTC GCCTGCTGGC TCGGCGCCTG TGTCTTCATC
GCGCAGTTCC TGCAGGATAC CCGCGCCTAT GGGGCGATGC TCTCCGGCTA CACGGTGGCG
ATCATCGCGG TCGCCCATAT CGACGCGCCG CAGACGGTGT TCGACGCCGC CATCGGCCGC
GTCGCCGCCA TCGCCGTCGG CATCGTCGCG ATCACCTTCA TCAACGACGC ACTCGCCTCG
CCGAGCACGT GGCGATCCCT GCTTCCGCGC CTCGCCGCGG CCCACGCGGC GGCCAAGGCC
TTCGCCCGCG AGAGCCTGAC GCAAGGGGAT CCCGGTCCGG AGCGCACCGC GGCCCTGGTC
CGGCAGGTCG CGCCGATGCG GGCGGATGCG AGCGCCATCG CGGGCGAACT CGACGACGGG
GTGCACCGGG CCGCGGGCGC CCGCAGCGCC ATCGCCGCAC TCTACGTCCT GGCCGCGGCA
AGCCGGGCGC TCGCGGCCGC GTTGGACCGT ATTCCCGAGC CGGGCCCGCG GGTGCGGGAG
GCGCACGCGC TCGCCCTGCG CGCGGTCTTG GACGGAGCGG ATGCGAGCCC CCAGACGCTG
GCCCGCGACG GCGAGCGGCT GCGCGACCTC GTCGATGCCG GGATGTGCGA GGCCAACGCC
TCCCTCGACG AGATCATGGC GCTCCAGCGC GCGCTGGACG TCACCAACGC CGCGACCTTC
GCCGAGGACG GCGTGCGCGC CCTCGGCGAC GGCCACGAGC CCCTGCGCGA CATCGCCCTG
CCGACCCATC GCGACTTTCA GGTCGCCGTG CGGGCTGCCC TGCGGGTGAT GATCGCCTTC
GGCCTCGCCG CCGGCCTGTT CATCCTGCTG GGGCTGCCGC AATCCTCCTT CGCCCTGGTG
CAGGTCGCGG CGACCTGCTC CCTCTCCTCG GTCACACCCG ATCCGCGCAA GTTCGCGCAG
GGCGTGCTGA TCGGGATGCC TCTGGCCGCC CTCTGCGCCG GGTTCATCCT GTTCGTGATG
CTCAACGGCA ACCAGGGCTT CCCCCTGCTC GCCATCGCCA TGGTGCCGCC GGTCGCCTTC
GGCTGCCTCC TGTCGCTCAA TCCGCCGACC TTCACCATCG GCTTCATCAC CCTGGTGTTC
ACGCCGGTGC TGCTCGCCCC GGAGAACCCG CAATCCTACG ATCCGCAGAC CTTCCTCATG
AACGGGCTCC TCGTCGTCGT GGCGGCGGTG ATCCTGTTCC TGACGATCCG TCTCGTCCTG
CCGATCTCGG CCTCGCAGCA CCGTGCCTTC GCCCTCGAAG AGGCCCGCCG CGACCTCGCC
GAAGCGCTCG TGGGGGAGGG CGGCGACGCC ACCACCCGCA CCAGCCTCAA TGCCGACCGG
CTGTTCCAGT TCTCGGCCTG GAATTCCGGC AGCGGCGCGG TGCGCCGCGC GAGCCTGCAC
CATGCCTTCG CCGTGGCGCA GCTCGAAGCC GCCGCCGCAC GGGCTCACGC GCAACTGCGC
CCGCTGAGCG AACTGAGCGG CCTCATCCCG CTGGTCACGC GGGCGCGCGA GGCGCTCGCC
TCCGCCCGCT CCGCCGACCT CGACCGGGCG GCGCGCGCGC TGATCGGAGA GGCGAGGGCG
CAGGACCGGA CCGTGCGCAT GCAACTCGCG CGCGCCGCCA CCGACCTCGC CACCGCCTCG
CACGTTATCC GGCGCCACGG ACGTTTCTTC CGGCGCCTGT CACTTCCGAG TTCCTGA
 
Protein sequence
MSGAAQPAGR AGLGERLLDA LDRWVPKPAA WAFALRIWLA MMLALYTAFW LQLDSASSAA 
VCVAILAQPK RGQALSKAGY RFLGTVIGGI VGILLIALFG QDRVLLLVSF ACWLGACVFI
AQFLQDTRAY GAMLSGYTVA IIAVAHIDAP QTVFDAAIGR VAAIAVGIVA ITFINDALAS
PSTWRSLLPR LAAAHAAAKA FARESLTQGD PGPERTAALV RQVAPMRADA SAIAGELDDG
VHRAAGARSA IAALYVLAAA SRALAAALDR IPEPGPRVRE AHALALRAVL DGADASPQTL
ARDGERLRDL VDAGMCEANA SLDEIMALQR ALDVTNAATF AEDGVRALGD GHEPLRDIAL
PTHRDFQVAV RAALRVMIAF GLAAGLFILL GLPQSSFALV QVAATCSLSS VTPDPRKFAQ
GVLIGMPLAA LCAGFILFVM LNGNQGFPLL AIAMVPPVAF GCLLSLNPPT FTIGFITLVF
TPVLLAPENP QSYDPQTFLM NGLLVVVAAV ILFLTIRLVL PISASQHRAF ALEEARRDLA
EALVGEGGDA TTRTSLNADR LFQFSAWNSG SGAVRRASLH HAFAVAQLEA AAARAHAQLR
PLSELSGLIP LVTRAREALA SARSADLDRA ARALIGEARA QDRTVRMQLA RAATDLATAS
HVIRRHGRFF RRLSLPSS