| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5281 |
|---|
| Symbol | |
|---|
| ID | 6309303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 5646023 |
|---|
| End bp | 5647990 |
|---|
| Gene Length | 1968 bp |
|---|
| Protein Length | 655 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642653964 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001927910 |
|---|
| Protein GI | 188584465 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.471967 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTCG CGACGGCCGC CTCGCGCCGA AAGATCCTTC CGAACCTCAC AATGGCAAAA
GCACCCGTGC CGGCGGGGGA GGGCGCGCCC GCGCCCCTCG AACGCCCCGG TCTCCTGACG
ACCTATCGCC GGCTCTGGCC CTATCTCTGG CCCCACGGCC GGGCCGACCT CCAGCGGCGG
GTGTTCATCG CCTTCGGCCT GCTCTTCGTT GCCAAGGCGG CGACGATGGT GATGCCGTTC
ACCTTCAAAT GGGCCACCGA CGCGCTGGTC GCGGCCATCG GCGAGAAGGA GGCCGCGGCC
GCCGTACCGG CGGGGCTGGT CTCCGCGCCC GTCCTCCTGA TCGCCCTCTA CGGCCTGTCG
CGCATCGCCA TGGCCGGGCT GACGCAGGTG CGCGACGGGC TGTTCGCCAA GGTCGCGATG
CACGCCGTGC GCAAGCTCGC GCTCCAGACC TTCGAGCACA TGCACCGGCT GTCGCTCCGG
TTCCACCTCG AGCGCAAGAC CGGCGGCCTG ACCCGCGTGC TGGAGCGCGG TCGCTCCGGC
ATCGAGGAAC TGTCGCGCCT GATGGTGCTG ACGCTTGTGC CGACCATCGT CGAGCTGGTG
CTCGTGCTCG GCATTCTCGC CTACGAATTC GACTGGCTCT ACTCGGTGGT CGTGGCGACG
ATGATCGCCG CCTATCTCGG CTTCACCTGG AAGGCGACCG AGTGGCGCAT CGGCATCCGA
CGCCGGATGA ACAACTCCGA CACCGAGGCC AACACCAAGG CGGTCGACTC GCTGCTGAAC
TTCGAGACGG TGAAGTATTT CGGCGCCGAG GGGCGCGAGA CCGCCCGCTA CGACGCGTCG
ATGGAGCGCT ACGAGAAGGC CTCGACCCAG ACTTACGTGT CGCTCGCGGT GCTGAACGCC
GGCCAGGCGG TGATCTTCAC ACTCGGCATG ACCGCGGTGA TGTGGCTCGC CGCCCGCGAC
ATCATGGCCG GGCGCACCAC CATCGGCGGC TTCGTGCTCG TCAACACGAT GCTGGTGCAG
CTCTCGATGC CGCTCAACTT CATGGGGATG ATCTACCGCG AGATCAAACA GGCGCTGATC
GACATCGACG ACATGTTCCT GATCCTCCAG CGCAATCCCG AGATCGCCGA TCGCCCGGGC
GCGCCCGCAC TCAAGGTGGA GGCGGGCACG GTCCGCTTCG AGGATGTGCG CTTCGCCTAC
AATCCGGACC GGCCGATCCT GCGCGGCGTC TCCTTCGAGG TCCCGGCGGG CCGCACAGTC
GCCATCGTCG GTCCCTCCGG GGCTGGCAAA TCGACGCTCT CGCGGCTGCT GTTCCGCTTC
TACGAGCCGC AGTCCGGCCG CATCACCATC GACGGCCAGG ACATCGCAGC GGTGCGTCAG
GACTCCCTGC GCGCGGCGAT CGGCATGGTC CCGCAGGACA CGGTGCTGTT CAACGACACC
ATCGGCTACA ACATCCGCTA CGGCCGCTGG GAGGCCAGCG AGGCGGAGGT GCGCGAGGCC
GCCCGCCTCG CCCAGATCGA CCGCTTCATC GAGAGCCTGC CGGAGGGTTA CGACACGCCG
GTAGGCGAGC GCGGCCTCAA GCTTTCGGGC GGCGAGAAGC AGCGGGTGGC GATCGCCCGC
ACCATCCTGA AGGGGCCGCC GATCCTCGTC CTCGACGAGG CGACCTCGGC GCTCGATTCC
TTCACCGAGC GCGAGATCCA GGCGGCCCTC GACCGGGTCA GCCAGGGCCG CACCACGCTG
GTGATCGCCC ATCGCCTCTC GACGGTGATC AACGCCGACG AGATCCTCGT GCTCGACCAG
GGCCGCGTCG TCGAGCGCGG TGACCATGCG GGCCTGCTCG CCCGCGGCGG AGTCTACGCC
GCTTTGTGGA ACCGCCAGCG CGAGGCGGAT GCCGCCCGCG AAGCGCTCAA GCGTGCCGAG
GACGAGCGCT CCCTCGCCGA GGCCGTCCGG CCGGAGCCGG TGATCTAG
|
|---|
| Protein sequence | MRLATAASRR KILPNLTMAK APVPAGEGAP APLERPGLLT TYRRLWPYLW PHGRADLQRR
VFIAFGLLFV AKAATMVMPF TFKWATDALV AAIGEKEAAA AVPAGLVSAP VLLIALYGLS
RIAMAGLTQV RDGLFAKVAM HAVRKLALQT FEHMHRLSLR FHLERKTGGL TRVLERGRSG
IEELSRLMVL TLVPTIVELV LVLGILAYEF DWLYSVVVAT MIAAYLGFTW KATEWRIGIR
RRMNNSDTEA NTKAVDSLLN FETVKYFGAE GRETARYDAS MERYEKASTQ TYVSLAVLNA
GQAVIFTLGM TAVMWLAARD IMAGRTTIGG FVLVNTMLVQ LSMPLNFMGM IYREIKQALI
DIDDMFLILQ RNPEIADRPG APALKVEAGT VRFEDVRFAY NPDRPILRGV SFEVPAGRTV
AIVGPSGAGK STLSRLLFRF YEPQSGRITI DGQDIAAVRQ DSLRAAIGMV PQDTVLFNDT
IGYNIRYGRW EASEAEVREA ARLAQIDRFI ESLPEGYDTP VGERGLKLSG GEKQRVAIAR
TILKGPPILV LDEATSALDS FTEREIQAAL DRVSQGRTTL VIAHRLSTVI NADEILVLDQ
GRVVERGDHA GLLARGGVYA ALWNRQREAD AAREALKRAE DERSLAEAVR PEPVI
|
|---|
| |