Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_5277 |
Symbol | rpsD |
ID | 6313427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 5642382 |
End bp | 5642999 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642653960 |
Product | 30S ribosomal protein S4 |
Protein accession | YP_001927906 |
Protein GI | 188584461 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0522] Ribosomal protein S4 and related proteins |
TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.9692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAAC GCGTCCAGGC GAAGCACAAG CTCGATCGCC GCATGGGCCA GAACATCTGG GGCCGCCCGA AGAGCCCCGT GAACCGCCGC GAATACGGCC CCGGCCAGCA CGGCCAGCGC CGCAAGGGCA AGATGAGCGA CTTCGGCACG CAGCTGCGCG CCAAGCAGAA GCTCAAGGGC TACTACGGCA ACATCACCGA GAAGCAGTTC CGCCGCTACT ACGCCGAGGC GATCCGCCTG CGCGGTGACT CCGGCGAGAA CCTGATCGGT CTGCTCGAGC GCCGCCTCGA CGCCGTGGTG TACCGCTCGA AGTTCGTCGC GACCCCGTTC GCCGCGCGCC AGTTCGTCAA CCACGGGCAC ATCAAGGTCA ACGGCCGCCG GGTCAACATC CCGAGCTACC AGGTCAAGGC CGGCGACGTG ATCGAGGTGA AGGAAGCCTC CCGCCAGCTC GAGATCGTGG TCGTGGCCTC GCAGCTCGCC GAGCGCGACG TGCCGGACTA CATCGAGGTC GATCATCAGA AGATGTCCGC CCGCGTCACC CGGATCCCGG GCCTCTCCGA GGTGCCCTAC CCGGTGCAGA TGGAGCCGAA CCTCGTCATC GAGTTCTACT CGCGCTGA
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Protein sequence | MSKRVQAKHK LDRRMGQNIW GRPKSPVNRR EYGPGQHGQR RKGKMSDFGT QLRAKQKLKG YYGNITEKQF RRYYAEAIRL RGDSGENLIG LLERRLDAVV YRSKFVATPF AARQFVNHGH IKVNGRRVNI PSYQVKAGDV IEVKEASRQL EIVVVASQLA ERDVPDYIEV DHQKMSARVT RIPGLSEVPY PVQMEPNLVI EFYSR
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