Gene Mpop_5265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_5265 
Symbol 
ID6309528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5631175 
End bp5632359 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content73% 
IMG OID642653948 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001927894 
Protein GI188584449 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG ATGTCAGCGG CCACCGCGCC CTTGCCCCGG CGACGCGCAT CGGGCTTACC 
CTGATCGCAG GCGGTGCGGT CGCGAACATC TACTACAACC AGCCGCTGCT CGCGGTCTTG
GTCGCCGAGT TCGGCGAGCG GGCGGCGCTG CTGGTACCGA CGGCCAGCCT CGTCGGCTAC
GGCCTCGGCA TCCTGTTCCT CGTGCCCCTG GGCGATGCCC TGCCGCGGCG CGACCTGATC
GTCTGGCAGT TGCTCGGGCT CGCCGTCGCC CTGGTGGCCG CGGCGCTCAG CCCCAACCTG
ACCGTGCTTG CCGCCGCAAG CCTCGTCATC GGCGTGCTCG CCTGCGCCGC ACAGCAGGCC
GTGCCCTTCG CCGCCGAACT CGCGCCCGAT GCGAGCCGGG GGCGGATCGT CGGCGGCGTG
ATGACCGGAT TGCTGTCCGG CATCCTGCTC GCCCGCACCG CCAGCGGGTT CGTCGGTGCG
CAATATGGCT GGCGCGCGGT GTTCTTCGCC GCCGCAGGCC TCGCCCTCGC CATGGCCGGG
GTGGCCTGGC GCACCCTGCC GCGCAGCGCG CCGAAGCAGC GCCTACGCTA CCGCGCCCTG
ATGCTCTCGC TGCTGCATCT GGTGCGCAGT CAGCCCATCT TACGCAATGC CAGCCTGTCG
CAGGCGCTGC TGTTCGCGAG CTTCAACGCC TTCTGGGCGA CCCTGGCGCT CCTGGTCGAG
GCGCCGCCCT TCGACCTCAC CGCGGCGGGG GCGGGGCTGT TCGGCGTCAT CGGGGTCGCG
GGCGCCCTGA TCGCCCCGTA TTCCGGCCGC TACAGCGACC GGCGCGGCGC CCGCCCGGTG
GTGATCCTCG GAAGCGTCCT GGTCGCGGCG GCCTTCGCGG TGCTGGCGCT CGCCGGGCAG
GTCTCGCTCA TCGCCATCGC CGTCGGCGTC CTGCTCCTCG ATATCGGCAT CAACGGCGCG
CTGATCGCCA ACCAGACCCG CGCCTACGCC CTCGCGCCCG GCGCCCGCGG GCGGATCAAC
ACCGTGCTGT TCACCGCCAT CTTCATCGGC GGGGCGGCGG GCGCCTTCCT CGGCTCGCGG
GCCTTCCTCC TCGCGGGCTG GCCCGGCGTC TGTGCCGTCG GCGGCGTCTT CGCGCTGGCC
GCGCTCGCGG TGTCCTGGCT GGGCGGCAGG GCCAAGCCGG CTTGA
 
Protein sequence
MSGDVSGHRA LAPATRIGLT LIAGGAVANI YYNQPLLAVL VAEFGERAAL LVPTASLVGY 
GLGILFLVPL GDALPRRDLI VWQLLGLAVA LVAAALSPNL TVLAAASLVI GVLACAAQQA
VPFAAELAPD ASRGRIVGGV MTGLLSGILL ARTASGFVGA QYGWRAVFFA AAGLALAMAG
VAWRTLPRSA PKQRLRYRAL MLSLLHLVRS QPILRNASLS QALLFASFNA FWATLALLVE
APPFDLTAAG AGLFGVIGVA GALIAPYSGR YSDRRGARPV VILGSVLVAA AFAVLALAGQ
VSLIAIAVGV LLLDIGINGA LIANQTRAYA LAPGARGRIN TVLFTAIFIG GAAGAFLGSR
AFLLAGWPGV CAVGGVFALA ALAVSWLGGR AKPA