| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5260 |
|---|
| Symbol | |
|---|
| ID | 6309523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 5625403 |
|---|
| End bp | 5626650 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642653943 |
|---|
| Product | DNA polymerase IV |
|---|
| Protein accession | YP_001927889 |
|---|
| Protein GI | 188584444 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCCG AGGGCGCCCT GCGGTGCCGC GGATGCGGCT CGCCGCGCCT GCTCGCGCAT
CCGGCCCGGG ACGCCCTCAG CATCGCCCAT GTCGATTGCG ACGCCTTCTA CGCGGCGATC
GAGAAGCGCG ACGACCCGTC CCTGCGCGAC AAGCCGCTGA TCATCGGCGG CGGCAAGCGC
GGCGTCGTCT CCACCGCCTG CTACCTCGCC CGGATCTCCG GCGTGCGCTC GGCCATGCCG
ATGTTCGAGG CGCTGAAGCG CTGCCCCGAC GCCACGGTGC TGCGGCCCGA CATGGAGAAG
TATGCCCGCG TCGGCCGCGA GGTGCGAGAG ATGATGCTGG CACTGACTCC GCTGGTCGAA
CCCGTCTCCA TCGACGAGGC GTTCCTCGAT CTCTCCGGTA CCGAGCGCGT GCATGGGGCG
AGTCCGGCGC TCACGCTCGC CCGCTTCGCT GCGCGGGTCG AGACGGAGGT CGGCATCACC
GTCTCGGTGG GGCTCTCCGC CAACAAGTTC CTGGCCAAGA TCGCCTCCGA CCTCGACAAG
CCCCGCGGCT TCTCGATCAT CGCGGGGGAC GAGGCGGCCG CGTTCCTCGC TGACCGGCCC
GTCGGCATCC TGCCCGGCAT CGGCGAGAGC GCCCGCAACC GCCTCGCCGC CCTCAACATC
CACCGCGTCG GCGATCTGTC GCGCGCCGAT CCGGTGCGGC TGCAAGCCTC CCTCGGCCGG
GACGCCCTGC GCCTCATCGA TCTTGCCGCG GGCCGCGACC GGCGGCCGGT CCGCCCGAGC
CGGGAGGCCA AGAGCGTCTC GGCCGAGACC ACCTTCGCCA CCGATCTCGT CCGGTTCGAG
GATTTGCGGC CGATCCTGTG GCGGCTGTGC GAGAAGGTCT CGTCACGGCT GAAGCGGGCC
GAACTGGCGG CCGGCAGCGT CACGCTGAAG CTGAAGGATG CGAAGTTCCG TCTGCGCACC
CGGACCCGCG GCGGCCTCAA ACCCACCCAG CTCGCCGACC GGCTCTTCCA CGAGGGCGAG
CCGATGCTGC GGGCCGCCTG CGACGGCACC GCCTTCCGGC TGATCGGCAT CGGTGGCGGC
GATCTTTGCG GCGCAATCCA TGCGGATCGC GGCGACCTCG CGGATCAGGG CATCGAGCGC
GTCGCCGCTC GGGAGGCCGC GCTCGACCGG CTGCGGAAGA AATTCGGCAG CGGCGCGATC
CAGCGTGGCC TCGTCTTCAC CGGGGAGCCG GAGCGGCGGC GCCCCTGA
|
|---|
| Protein sequence | MQAEGALRCR GCGSPRLLAH PARDALSIAH VDCDAFYAAI EKRDDPSLRD KPLIIGGGKR
GVVSTACYLA RISGVRSAMP MFEALKRCPD ATVLRPDMEK YARVGREVRE MMLALTPLVE
PVSIDEAFLD LSGTERVHGA SPALTLARFA ARVETEVGIT VSVGLSANKF LAKIASDLDK
PRGFSIIAGD EAAAFLADRP VGILPGIGES ARNRLAALNI HRVGDLSRAD PVRLQASLGR
DALRLIDLAA GRDRRPVRPS REAKSVSAET TFATDLVRFE DLRPILWRLC EKVSSRLKRA
ELAAGSVTLK LKDAKFRLRT RTRGGLKPTQ LADRLFHEGE PMLRAACDGT AFRLIGIGGG
DLCGAIHADR GDLADQGIER VAAREAALDR LRKKFGSGAI QRGLVFTGEP ERRRP
|
|---|
| |