| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5246 |
|---|
| Symbol | |
|---|
| ID | 6313301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 5614020 |
|---|
| End bp | 5614949 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 642653929 |
|---|
| Product | carbohydrate kinase, YjeF related protein |
|---|
| Protein accession | YP_001927875 |
|---|
| Protein GI | 188584430 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0063] Predicted sugar kinase |
|---|
| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCGC CCATGACCGA GAACCGCCTC ACGCTCGCTC GCCTGCGAGA CCGGCCGCTT
CCGATGCCGG AGGAGGGCAG CAAGGAGCAG CGCGGGACGG TCCTCGTGGT CGGCGGATCC
GCCGAGGTTC CGGGCGCCGC CTTCCTGGCC GGCATCGCCA CACTCCGAGC CGGTGCCGGG
CGTCTCAGGA TCGCGACGGT CGCCAGCGCT GCGTCGGCCA TGGCGCTCGC GGTACCCGAG
GCACGGGTCG TCGGGCTCGC CGAGACCGAT GAGGGCACCA TCGCCCCGGA CGCGGCCGAG
GCGCGCCTGC CGGCGCTGGC CGAACGCTGC AAGGCGGCGC TGATCGGTCC AGGCCTGAGT
GCCGGCGAAA CCGCCGAAGC CGTGTCCCGC GCGCTCTTGC CGGGACCGGG GGCAGCGGCT
CGGGAAACAC CTGCCCTGGT GCTCGATGCC GGCGTGATCG CCGGTCTCGG CGCGCATGCC
GATGCGGTCC GATCCTGCGG CGGGCGCGCG GTGATCACGC CGCATGCCGG CGAGATGGCC
CGGCTCCTGG ACATCGAGCG AAGCGCGGTC GAGGCGGATC CGCTGGCTGC GGCGCGCCGG
GCGGCGGACC GGCTCGGATG CGTCGTGATC ATGAAGGGTG CGCGGAGCTG GATCGTCGAT
CCCGCCGGGG AGCCGTGGCT CTACGGCGGT GGTGGGGTCG GGCTCGCCAC GTCCGGCTCC
GGCGATGTCC TGGCGGGGAT CGTCGCGGGC CTTCTCGCAC GGGGCGCCGA TGCCCCGACC
GCGGCAGCGT GGGGCGTCTA TCTGCACGGG CAGGCCGGGC GAATGCTGGC CGACCGCGTC
GGGCCTATCG GGTTTCTCGC CCGCGAGATC GCCGATGTGA TCCCCGCCAT CCTGCGCGCG
GCCGAGACAG AGTCCGGCGC GTCCGGATAG
|
|---|
| Protein sequence | MQPPMTENRL TLARLRDRPL PMPEEGSKEQ RGTVLVVGGS AEVPGAAFLA GIATLRAGAG
RLRIATVASA ASAMALAVPE ARVVGLAETD EGTIAPDAAE ARLPALAERC KAALIGPGLS
AGETAEAVSR ALLPGPGAAA RETPALVLDA GVIAGLGAHA DAVRSCGGRA VITPHAGEMA
RLLDIERSAV EADPLAAARR AADRLGCVVI MKGARSWIVD PAGEPWLYGG GGVGLATSGS
GDVLAGIVAG LLARGADAPT AAAWGVYLHG QAGRMLADRV GPIGFLAREI ADVIPAILRA
AETESGASG
|
|---|
| |