Gene Mpop_5234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_5234 
Symbol 
ID6309242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5600522 
End bp5602453 
Gene Length1932 bp 
Protein Length643 aa 
Translation table11 
GC content68% 
IMG OID642653915 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001927863 
Protein GI188584418 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGTAT TCTCGTACAC GCAGATTAGT CATCTCGATG AAATGTTCCA GGCGCGTTCG 
CAATTCGAAT CCGCTGCCCG GACGCTCTAC ACCATCAATG GCCTGACCGA CCGATTGGTC
GGCCAAGCGG CCGAGTATCG ACTGACGCAG GAGCCCGGAT ATACCACCGG AATGGCGTCG
TCGCTCGACG CGATCCGGCA GGGCTCCGAG ACCCTCATCG CTAACACGCC GAGCGCGGAG
CGGCGCGCGG CCTACGAGCG GCTGCGCGAC CAGTCGATCG ATCTCGGCAA AACGCTGCCG
AAGCTGACCG AACTCGGCAA TCAGATCCGC GAGAACCGCG CCGGCGTCTA CGCCAACGGT
GACGACCTCA CCAAGGCCTC GGGTCTGCTG GTCGCGCAAT TGCGGGCCAC GGGCCAGGAT
GCCGTCATCG CGCAGGCCGT GGAGGTCGAA CGCGCGCTCC TCCTGTTCCG GGTCATGAAC
TGGCGCTTCC TCGCCACCAA GGATCCGAAC GGGCGCGCGC TCTCGGCCAA GGCCTTCAAC
AACGCCGAGG CGGCCCTTAC GAAGCTCAAC GGCCTCGATC TCAGCGTCGC CGATCAGAGG
ATGGCGAAAA CCGTCGACGA GGCCCTGATC CGCCTCAACA AGAGCATCGT CGCCGCCTCT
CAGGCCATCG TCGAGAGCGA AACCTTCTTC GATGAGACGC TGAAGCCGAG AGTGGACCGG
ATCGACGCCA TCGGACGCGA TGTGCGGGGC AAGCTCGAAG CGGCGCTCGA ACAGGGCGTG
GCACAGAGCA ATGCCCTGAT GTCGCGGACG AAATCGGTCC AGATCGCGCT GCTCGGCCTG
ATCCTGGCAT TGGGCGCCGC CTTGGCCGTC CTGATCGCCC GCAGCCTGAT CCGTCCGATC
TCGGGAATGA CCGCCGCCAT GACCCGCCTC GCGGACGGCG AGACGGCGAT CCACGTGCCC
TCGCAGGACG CGACCGACGA GATGGGTCGG ATGGCCGCGG CCGTGGAAGT CTTCCGGCAG
AACGCGGTGG CGCGGATCGC GCTCGAAGCG GAGCAGGCGG CGCAGGCCTC CGCCCGCCAG
CGCCGGGCCG ACCGGGTCGA TCAGCTTGTG CGCGGCTTCG AGGACAGGAT CGCCGCCTCC
ATCGCCATCG TGACCTCGGC GGCGACCGAA CTCGACTCCA CCGCCCGGTC GATGACGCAG
GTCGCCGACA GCACCAACGG GCAGGCGGTC TCCTCCAGCG CCGCCGCCGA GGAGGCCACC
ATGAACGTGC AGACGGTCGC CGCCGCCGCC GAGGAGATGG TCGCCTCGCT CGGGGAGATC
GAGCGGCGCG TGCAGCAATC GAACGACGTC GCGAACCACG CCGACCACGA GGCGCAGGCG
ACCACCGCCT CGATGTCCGA TCTCAGCCGC GCCGCCGAGA AGATCGGTGA AGCCGTGACG
ATGATCTCGG GACTCGCGAG CCAGACCAAC CTGCTGGCGC TGAACGCCAC CATCGAGGCG
GCGCGCGCCG GCGAGGCGGG CCGCGGCTTC GCGGTCGTTG CCACCGAGGT CAAGGAACTG
GCCGCGCAGA CCGCGCGCAC CACTGACGCG ATCTCCGATC AGGTCGCCGC GATCCAGTCC
GCCTCAACCC AGGCGCTCGG CGCGATCCAG CAGATCGGCC GGACCATCGT CTCGGTCAAC
GACATCACCG CCTCGATCGC GGCGACCGTC GTGCAGCAGA CCGCGGCGAC CAACGAGATC
GCCCGCAACG CTTCCGAGGC GGCCCGCGGC ACCCAGGACG TGTCGATGAG CGTGGCGCAG
GTGCAGGCGT TGTCGAGCGA GACCGGATCG GCCGCGCAGC AGGTGATGAT GGCCTCGTCC
GAGCTCGCGA CCCAATCGGA GAACGTGCGG CGCGAAGTCG AGGATTTCCT CGCTGCAATC
CGGGCGGCCT GA
 
Protein sequence
MGVFSYTQIS HLDEMFQARS QFESAARTLY TINGLTDRLV GQAAEYRLTQ EPGYTTGMAS 
SLDAIRQGSE TLIANTPSAE RRAAYERLRD QSIDLGKTLP KLTELGNQIR ENRAGVYANG
DDLTKASGLL VAQLRATGQD AVIAQAVEVE RALLLFRVMN WRFLATKDPN GRALSAKAFN
NAEAALTKLN GLDLSVADQR MAKTVDEALI RLNKSIVAAS QAIVESETFF DETLKPRVDR
IDAIGRDVRG KLEAALEQGV AQSNALMSRT KSVQIALLGL ILALGAALAV LIARSLIRPI
SGMTAAMTRL ADGETAIHVP SQDATDEMGR MAAAVEVFRQ NAVARIALEA EQAAQASARQ
RRADRVDQLV RGFEDRIAAS IAIVTSAATE LDSTARSMTQ VADSTNGQAV SSSAAAEEAT
MNVQTVAAAA EEMVASLGEI ERRVQQSNDV ANHADHEAQA TTASMSDLSR AAEKIGEAVT
MISGLASQTN LLALNATIEA ARAGEAGRGF AVVATEVKEL AAQTARTTDA ISDQVAAIQS
ASTQALGAIQ QIGRTIVSVN DITASIAATV VQQTAATNEI ARNASEAARG TQDVSMSVAQ
VQALSSETGS AAQQVMMASS ELATQSENVR REVEDFLAAI RAA