| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5212 |
|---|
| Symbol | |
|---|
| ID | 6309503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 5579646 |
|---|
| End bp | 5580503 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642653893 |
|---|
| Product | Indole-3-glycerol-phosphate synthase |
|---|
| Protein accession | YP_001927841 |
|---|
| Protein GI | 188584396 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.69886 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGACA TCGTGGCCGA CGTGACCGTC GGGCCTGCCA CGACCGCCCC CGAGCGGGCG
AGCGTGCTGG CGCGGATCGA AGCCTACAAG CGCCGCGAGA TCGCCGAGGC GAAGCTGCGC
GTGCCGCTGG CCAAGCTTGA GAAGCAGGTG GCTAAAGCCG AACCGCCCCG CGGCTTCGCC
GACGCCATCG CCGCCCATAT CGCGGAAGGC CGCCCGGCCC TCATCGCCGA GATCAAGAAG
GCTTCGCCCT CCAAGGGGCT GATCCGCGCC GATTTCGACC CGAAGACGCT GGCCGAAGCC
TATGCCAGGG GCGGCGCCAC CTGCCTCTCG GTGCTCACCG ATACGCCCTC CTTCCAGGGC
GCGCCGGATT TCCTCACCGA GGCCCGTGCG GCCTGCGACC TGCCGGTTCT GCGCAAGGAT
TTTCTGTTCG AGCCCTATCA GGTCTACGAG GCCCGAGCCT GGGGCGCCGA TTGCGTCCTC
GTCATCATGG CCTGCCTGGA CGACGCCGAG GCCGCCGCCA TCACCGAGAC CGCGCACGAT
CTCGGCATGG ACGTGCTGGT GGAGGTTCAC GACGCCGAGG AATTGGAGCG GGCCCTGCCG
CTCGGCACCC GGCTCGTCGG CGTCAACAAC CGCAACCTCA AGACCTTCGA GGTCTCGTTC
GAGACGGCGA TCCGGCTCAA GCCCGGCATT CCCGCCGACC GTATTGCGGT CGCCGAGAGC
GGCATCGGCG GACATGCCGA CGTGCTGCGC TTGAAGCAGC ATGGGCTCGA CACCATCCTC
GTCGGCGAGA GCCTGATGCG GCAGGCCGAC GTCACCGCGG CGACGCGGGC GCTGCTGTTC
GGGGATGCCA GACGGTGA
|
|---|
| Protein sequence | MDDIVADVTV GPATTAPERA SVLARIEAYK RREIAEAKLR VPLAKLEKQV AKAEPPRGFA
DAIAAHIAEG RPALIAEIKK ASPSKGLIRA DFDPKTLAEA YARGGATCLS VLTDTPSFQG
APDFLTEARA ACDLPVLRKD FLFEPYQVYE ARAWGADCVL VIMACLDDAE AAAITETAHD
LGMDVLVEVH DAEELERALP LGTRLVGVNN RNLKTFEVSF ETAIRLKPGI PADRIAVAES
GIGGHADVLR LKQHGLDTIL VGESLMRQAD VTAATRALLF GDARR
|
|---|
| |