| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5183 |
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| Symbol | |
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| ID | 6309232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 5550749 |
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| End bp | 5553193 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642653864 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_001927812 |
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| Protein GI | 188584367 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGCA CGCAAGCTTC CGCCGCCGTC GAATCCTTGA GCGAGGACGC CGCCCAGGCG
CGCCACGCCG AGCTGTCCCG GGCGATCGAG CGGGCGAACC ACCTCTACTA CAATGAGGAC
GCGCCCGAAC TGACGGACGC CGAATACGAC GCCCTGCGTC AGGAGCTGGA AGCGATCGAG
GCGCGCTTTC CCGCGTTGAC CGGCACCACC GAGGCGAGCG CGGGCGTCGG CGCCAAGCCC
TCGGAGAAGT TCGCCAAGGT CCGCCACGCG GTGCCGATGC TGTCCCTCGG CAACGCCTTC
GCCGACGAGG ACGTGGACGA GTTCGTCGCC CGCGTGCGCC GCTTCCTCAA CCTGACGGCC
GAGGAGCCGG TCGCCTTCAC CGCCGAGCCG AAGATCGACG GGCTCTCGCT CTCGCTGCGC
TACGAGGCCG GCCGGCTCGT CACCGCCGCG ACGCGCGGCG ACGGCGAGGT CGGCGAGAAC
GTCACCGCCA ATGCGCTGAC GGTCGAGGAC ATCCCGGCGA CGCTGTCGGG CAAGGACATT
CCCGAGGTGC TGGAGGTGCG CGGCGAGGTC TACCTCTCCC ACGAGGATTT CGCGGGCATC
AATGCGCGCC AGGAGGCGGC GGGCAAGCCG CTCTTCGCCA ACCCGCGCAA CGCGGCGGCC
GGGTCGCTGC GCCAGCTCGA TCCGGCGATC ACCGCCTCGC GGCCCTTGCG CTTCTTCGCC
TATGCCTGGG GCGAGGTCTC CGAGCCCTTC ACCGACACGC AGTCGGCGGT GCTGGAGCGG
TTCCGCGGCT GGGGCCTGCC GGTCAATCCG CGGACCAAGC TGTGCCGCTC GGCGGAAGAG
ATGATCGCGC ATTACCGCGC CATCGAGGCG GAGCGAGCCG GCCTCGGCTA CGACATCGAC
GGTGTCGTCT ACAAGGTCGA CGACCTCGGC TTCCAGCGCC GGCTCGGCTT CGTCAGCCGG
GCGCCGCGCT GGGCGCTGGC ACACAAGTTC GCGGCGCAGG AGGCGATCAC CGAACTCCTC
GCCATCGACA TCAATGTCGG CCGCACCGGC TCGCTCAATC CGCTGGCCCG CCTCAAGCCC
GTCACCGTCG GCGGCGTCGT TGTCTCGAAC GCGACGCTGC ACAACGAGGG CTACGTCCAG
GGCGTCGGCG CCGACGGCGA GCCGATCCGC GAGGGGCGCG ACATCCGCGT CGGCGACACG
GTGATCGTGG TGCGTGCCGG CGACGTGATC CCCAAGGTGA TGGACGTGGT GCTCGACAAG
CGCCCGGCCG ACGCCGTTCC CTACGTCTTC CCCGAGACCT GCCCGGCCTG CGGCAGCCGG
GCGGTCCGCG AACTGAATCC CCGCACGAAG AAACTCGACG CGATCCGCCG CTGCACCGGC
GGGCTGATCT GCCCGGCGCA GGGGGTGGAG CGGCTGAAGC ACTTCGTCTC GCGCAACGGC
TTCGACCTCG AAGGGTTCGG GCAGACCTAT ATCGAGGTGC TGTTCGAAGC CGGCCTCGTG
AAGCAGCCGG CCGACCTGTT CCGGCTTGAA TTCGAGCCCT TGAAGGCGGC GATCGTCGCC
CGGCGCGAGG CGCTCTCCGC GCAACGTCGC GCCGAGGGCG AGCCGGCGCC GAAGAAGCCG
ACCAAGAAGA AGGGCGAGGA GGAAGACAAG GCGATCAAGA ACCTGCTCGC CTCGCTGGAG
GCGCGGCGGA AAATCGCGCT CAACCGCTTC CTGTTCGCGC TCGGCATCCC GCAGATCGGC
GAGTCGACCG CCAAGGCTTT GGCCAAGCGC TTCCCCGACA TGCCCGCGCT GATGGCAGCC
CTCGAGGCGG CAACGCGGGA GCAGGCGGGC CGCGACTGGC TCGAACTCTC GGCACTCCCC
CGGATCGGAC CTGGCACCCG CGACCGGCTG TTCGAGACCC TCGATCCGCT GCCGGGCGAG
GCGATGCAGG ACCTCAGCCT CGGTGCGCGC CTGCGCGGAC GGCTCACGCC CTCCCAACGG
GAGGCGGTGC TCGCCCATTA CGGCAGCGAG GAAGAGGCCG ACGCGGCCCT CGAACGGGCG
GCCTCGCAGC GGCCGGGCGA CGCCTACCGG CTGTTCGCCG ATGACGGCGA GATCGGCCCG
GTGGCGACGG ATTCGCTGAT CCAGTTCTTC TCCGAGCCGC ATAACGACGC GGCGGTGCGG
GCGCTGCTCG AAGAGGTCGG CACCGAGCCG CTTGCCGCCA CGACCTCGGC AGCCGCGTTC
GCCGGCAAGA CGGTGGTGTT CACCGGCACC CTGGAAAAGA TGACCCGCAG CGAGGCCAAG
GCCACCGCCG AGCGGCTCGG CGCGAAGGTC TCCGGTTCGG TCTCAGCCAA GACCGATCTC
GTGGTCGCCG GGCCCGGCGC CGGCTCGAAG CTCAAGGACG CCGAACGTCA CGGGGTGAAG
GTGGTCTCCG AGGACGATTG GCTGGCGATG CTGGCGGAGG CTTAA
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| Protein sequence | MPRTQASAAV ESLSEDAAQA RHAELSRAIE RANHLYYNED APELTDAEYD ALRQELEAIE
ARFPALTGTT EASAGVGAKP SEKFAKVRHA VPMLSLGNAF ADEDVDEFVA RVRRFLNLTA
EEPVAFTAEP KIDGLSLSLR YEAGRLVTAA TRGDGEVGEN VTANALTVED IPATLSGKDI
PEVLEVRGEV YLSHEDFAGI NARQEAAGKP LFANPRNAAA GSLRQLDPAI TASRPLRFFA
YAWGEVSEPF TDTQSAVLER FRGWGLPVNP RTKLCRSAEE MIAHYRAIEA ERAGLGYDID
GVVYKVDDLG FQRRLGFVSR APRWALAHKF AAQEAITELL AIDINVGRTG SLNPLARLKP
VTVGGVVVSN ATLHNEGYVQ GVGADGEPIR EGRDIRVGDT VIVVRAGDVI PKVMDVVLDK
RPADAVPYVF PETCPACGSR AVRELNPRTK KLDAIRRCTG GLICPAQGVE RLKHFVSRNG
FDLEGFGQTY IEVLFEAGLV KQPADLFRLE FEPLKAAIVA RREALSAQRR AEGEPAPKKP
TKKKGEEEDK AIKNLLASLE ARRKIALNRF LFALGIPQIG ESTAKALAKR FPDMPALMAA
LEAATREQAG RDWLELSALP RIGPGTRDRL FETLDPLPGE AMQDLSLGAR LRGRLTPSQR
EAVLAHYGSE EEADAALERA ASQRPGDAYR LFADDGEIGP VATDSLIQFF SEPHNDAAVR
ALLEEVGTEP LAATTSAAAF AGKTVVFTGT LEKMTRSEAK ATAERLGAKV SGSVSAKTDL
VVAGPGAGSK LKDAERHGVK VVSEDDWLAM LAEA
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