| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5170 |
|---|
| Symbol | |
|---|
| ID | 6312929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 5535409 |
|---|
| End bp | 5535852 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642653851 |
|---|
| Product | PilT protein domain protein |
|---|
| Protein accession | YP_001927799 |
|---|
| Protein GI | 188584354 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCAGCT ATCTCCTCGA CACCAACATC ATCAGTAACG TCATCAAACC CGACCCGTCG
CCGCGTCTCC TTGCTTGGAT GGCGGAACAG CAGGACAGCG AACTTTTCAT CGCGTCCGTG
ACGCTTGGTG AGATCCGCCG CGGCATCCTC CAGTTGCCCG ACGGGCGAAA ACGGGCTCGG
CTGGAGACCT GGTTCTCGGG CGAGGAGGGC CCACTTGCGT TCTTCGCTGG CCGCATCCTT
CCTTTCGATG CGGATGCCGC CATGGTTTGG GCCCGCTTGA TGGCCGATGG GCGCCTACGC
GGGCGCCCGC GCGATGCAAT CGACATGATG CTGGCGGCCA TCGCCCAGGC ACACGGGCTC
ATCGTCGTGA CGGACAACGA GCGGGACTTC GATGGCCTAT CCTTCTTCAA TCCGGTCCGT
GACGGGAGCC GTCTGCTGCT TTGA
|
|---|
| Protein sequence | MTSYLLDTNI ISNVIKPDPS PRLLAWMAEQ QDSELFIASV TLGEIRRGIL QLPDGRKRAR
LETWFSGEEG PLAFFAGRIL PFDADAAMVW ARLMADGRLR GRPRDAIDMM LAAIAQAHGL
IVVTDNERDF DGLSFFNPVR DGSRLLL
|
|---|
| |