Gene Mpop_5064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_5064 
Symbol 
ID6313018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5427017 
End bp5428096 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content73% 
IMG OID642653746 
Productprotein of unknown function UPF0118 
Protein accessionYP_001927695 
Protein GI188584250 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.949113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCGA GCGATCAGAC GGAGCCCGAG GCCGCCCGCA TCCAGAGGGT GCTGCGCGCC 
CTCTTGGTCG CGGCCTTGCT GGGGCTCGGC CTCTATATCC TGCACGGGTT CCTGCGGGCG
CTGGTCTGGG CGCTGGTGCT CGCCATCGCC CTGTGGCCGC TCTTCAACCG CGCCCGCCGC
CGCTTCCCGC CGGGGCGGCA CAACATCCTC TGGCCGGCCG TCTTCACCGG CCTCGTCGCC
GGGCTCCTGC TGCTGCCCAT CGCCGGGCTG GCGGTCGAGG CGGGCCGTGA GGCGCACGAC
CTCCTGGCCT ATGCCCGCGA GGCCGAGCGC AACGGGATCC CCGTCCCGGA CTTCGTCGCC
CACCTGCCCT ATGGGGCTGC GGCCGTCACC GAGTGGTGGA ACGCCCACCT CGCCCATGCG
GGTCTGGCGC ATGAAGTGAC CGAGCGCCTC AACACGACCT CGAACCGCGA TCTGACGCGC
ACCCTCGGGG CCGGGCTGGT GCACCGGGTG GTGTTGTTCG GCTTCTGCCT GCTGGCCCTG
TTCTTCCTCT TCCGCGAGGG CGATGCGGTG GTCGCCCAGT CGCTGCGGGC GAGCCAGCGC
CTGTTCGGGC CCCGCGGCGA GCGGGTGGCG CGCCAGATGG TGGCCTCCGT CCACGGCACC
GTGGACGGGC TCGTCCTCGT CGGGATCGGC GAGGGTTTCC TGCTCGGGAT CGTCTACGCG
CTGGCCGGCG TGCCGCATCC GGTGCTGTTC GGGGCGCTCA CCGCGGTCGC CGCGATGATC
CCCTTCGGCG CGCCCCTGGC CTTCGGCCTC GCCGCCGTGC TGCTCCTGGC GGGCGGGGCG
GTGGTTCCCG CCGCGATCGT GGTGGCGGCA GGCTTCGTCA TCACGTTTGT GGCCGACCAC
TTCGTGCGCC CGGCGCTGAT CGGCGGCACC ACCCGCCTGC CCTTCCTGTG GGTGCTGCTC
GGCATCCTCG GCGGCGTCGA GACCTTCGGC CTGCTCGGGC TGTTCGTCGG CCCGGCGGTG
ATGGCCGCGC TGATCCTGCT GTGGCGGGAA CTGACGGAGG GGCCGGAGAC GTCGGCCTGA
 
Protein sequence
MRPSDQTEPE AARIQRVLRA LLVAALLGLG LYILHGFLRA LVWALVLAIA LWPLFNRARR 
RFPPGRHNIL WPAVFTGLVA GLLLLPIAGL AVEAGREAHD LLAYAREAER NGIPVPDFVA
HLPYGAAAVT EWWNAHLAHA GLAHEVTERL NTTSNRDLTR TLGAGLVHRV VLFGFCLLAL
FFLFREGDAV VAQSLRASQR LFGPRGERVA RQMVASVHGT VDGLVLVGIG EGFLLGIVYA
LAGVPHPVLF GALTAVAAMI PFGAPLAFGL AAVLLLAGGA VVPAAIVVAA GFVITFVADH
FVRPALIGGT TRLPFLWVLL GILGGVETFG LLGLFVGPAV MAALILLWRE LTEGPETSA