Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_5055 |
Symbol | |
ID | 6313250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 5416941 |
End bp | 5420276 |
Gene Length | 3336 bp |
Protein Length | 1111 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642653737 |
Product | signal transduction histidine kinase |
Protein accession | YP_001927686 |
Protein GI | 188584241 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.372822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGATT GGCCGCGCGG CGAAGGCATG GCGAAGCAGA TCCGTGTCCA TGACTGGGCA CGGACGCCGC TCGGGCCAAT CGAGGATTGG TCGCAGGGCT TGAAGACGGT CGTCGAGCTG ATGCTCGGCT CACCGCTGCT GGCTGCCATC GCTTGGGGGC CAGACCTGAC CGTGCTCTAC AACGACGGAT TCGAGGCCAT CAACGCCGCC CGGGTCCACG CTCCGCTGGG ACGGCCCTTC AGTGATGTCT GGCCGACGGC GGAGGGCGAG GAGATCGCCC GGCAGCTCCG CCGTGGGGAG GCGCGACACA CGATCGACCG TTTCTGGCAA TTGCCCGCGC GGCCGGAGCG GCCCTTCGGC TGGTTCACGT TGAGCTGGAC GCCTATTCGG GACGAGGCTG GCGGCGTCCT CGGCGCCTAT CTCTCGACAA TCGAGACGAC CGACCGGATC CTAGCCGAGC GTGCCCTGCG GGAGCGCGAG GAACAGCAGG CCTTCGTGCT CGGCCTCAGC GACGCGCTGC GTCCCCTCGC CGATCCGCTC GAAGTCCAGG CCGTCGCCTG CCGGCTTCTG GGCGAACACC TTCAGGCGGA TTACACCTAC TACCTCGACC TGTACGAGGC CGAGGGCTTC GCGGTCATCG CACAGGACTT CGCACGCGCC GGTCTTCCCT CGCGGGCGGG GTCATATCCG CTCGATCTCG TCGACTGGGC AATACCCCAT CATGAGCAGG GCCAGCCGAT CGCGATCACC GATGTGCGGA CGTCGCCTAT GGTCCCGGAC CACTGCCGGG AAAGGGTGCT GGCCGACCGG GTCGTGAGCC TGCTCGGCAT TCCGCTGCTG AAGGAGGGCC GCCTCGTCGG TGCGCTCGCC GTCTCCATGA CGACACCGCG GGAATGGACC CCTGCGGAGA TCACGCTGGC CACCGAGATC GGCGAGCGCA CCTGGGCGAC GATGGAGCGG GCCCGTGCGG AGAAGACGGC GCGCGAGGCC GACATCCGCC TGCGCACCAT GGCCGATGCG GCCCCGGTCC TAATCTGGGA CGTGCATTCG AGCGGCACGA TCTTCGTCAA CGACCACTAT CTCGACTTCT TCGGTGTCGC CTCCGATGCC GTCGGAGCGC ATGTCTGGGA GAGGTTCCTG CATCCCGAGG ATGCCGAACG GCACCTGGCC GTCTTCCGGG AGGCGTTCAG GCAGCGCCGA TCGTTCACCG ACGAGGCCCG GCTCCGCCGC GCCGACGGGC AGTATCGCTG GCTGAGCAGC TCCGGCCGGC CGTTGGAGGA CGGCCGCTTC GTCGGCGTCT CGATCGATGT CACCGAACGC CGCCTCGCCG AAGAGCGCGT CAGGCGCAAC AACGCCGTCC TCCAGGCGAT CAACCTCATC TTCAGCGAGA CGCTGGGCGC CTCCTCGGAG GAGGAACTGG CGCGCATCTC CCTCGATGTC GCCGAGGAAC TGACCGGCAG CGCCATCGGC TTCATGGGCG AGATCGACGC GGCGACCGGG CGCCTCGACG GCCTGTTCTT CAGCGACCGG AGCCGGGCCC GCCACGCCGC GCGAGCGCCG GAAGGGGGGA GCAGCCTGCC GCTGGACGCG CTGTCGCTGG AGCTCGCGGT CAACGGCCTC TACGGGCGCG TGCTGCAGGA CGGCACGGGC TTCATCGTCA ACGATCCCGC CGCACACCCG GACCGCGGCG GCACCCCGCC CGACCAAGAC CACGACCACA ACCACGTGCC GCTGACGGCC TTCCTCGGCG TGCCGCTGAA GCAGGGCGAC CGGACGCGGG GCCTGATCGG GCTCGGCAAC CGCGAGGGTG GCTACCGGCC GGAGGATCTG GAGGCCGCGG AGGCGCTGGC ACCCGCGATC TGGCACGCCC TGCGGGCCAA GCGCGCCGAG TTGCGCCTGC GCGAGAGCGA GGAGCGGTTC CGGCAATTCG CCGAGGCGTC CTCCGACGTC CTCTGGATCC GCGACGCGGA GACGCTCAAG ATGGAGTTCG TCAGCCCGGC GCTGCGGACG GTCTATGGCC TCGAAACGGA CGTGCTCGGA AGCGACGTCC AGCGATGGGC CGGCCACATG CTGCCGGAGG ATCGCGGGCG CGCCCTGCAG AACCTACAAC GGGTTGCCGC CGGTCAATCG CTGCTGAACG AGTTCCGCAT CAAGCGCCCG AGCGACGGGG CCTTCCGCTG GATCCGCAGC ACGCTGTTCC CCCTGCGCGA CGAGCAGGGC CGGGTGCGGC GCATCGGTGG TCTCTCCTCC GACATGACCG AGGCCAAGCT GCTGACCGGG CATCAGGCCG TGCTCATGGC CGAGTTGCAG CACAGGGTGC GCAACATCAT GGCGGTGACC CGCTCGATCG TCGCCCGCAC CGGCGAGCGG GCGGAGAGCG TGTCCGAGTA CGCGTCCCTC GTCGGAGGGC GGCTCCTGAC GCTGGCCCGC GTTCAGGCGC TGCTGACCCG CTCCGCCAAT GCCGGCGTGC CCGTGGCCAC CATCGTCCAC GACGAGATCG ATGCCCAAGC CCTGCGCGAG GACCAATACG ACCTGTCCGG ACCCGAGGTC GAGCTGTCGC CGAAGGCGGC GGAGATCCTG ACGCTCGCGG TCCACGAACT GGCGACCAAC GCCCTGAAAT ACGGGGCGCT ATCGGTGCCG GAGGGCCGGG TGCGGGTGCG CTGGACCTTG TTCGACAAGC GCGGCGAGTC GTGGCTCGGC TTCGATTGGG CGGAGGATGG TGTGCCGGGC GCGGAGACCC GCAACGACGG TCGAACCGAG CATCCCTCGA TGACGCGCCG CGGCTTCGGC CGTGAACTGA TCGAGGGGCG TCTGCCTTAC GAACTGGGTG GACGCGGCCG TCTGGAAATC GGCCCGGAGG GCGCGCGTTG CCGCCTCGAG TTTCCGCTGC GCGACGGGGC CAGCATCCTG GAGACCGACG CCCCGCAACG CGCAACCGTA TCCGGAGGAG CGCTCGACAT GACCGGAGAA GCAGACCTGA GCGGCCACCG CATCCTCGTT GTGGAGGACG ACTACTATCT CGCCACCGAC ACGGCGCGCG CCCTTCAGGG GGCGGGGGCG GAGGTCATCG GCCCCTGTCC GAGCGAGGAG GCGGCCCGCG ACGCCCTCGA AGAGGGAGCG CCCGCAGCGG CGCTGGTGGA CATCAACCTG GGCTCGGGGC CGTCCTTCAC CCTGGCGGCG CTGCTGCGGG AGCGCGGCGT GCCGTTCGTG TTCATCACGG GCTACGACGA GGGCGTGATC CCGCCGGATT TCGCCGATGT CGAGCGCCTG CAGAAGCCGG TCGAACTGAA GCGGGTCGTT CAATTCGTCG CCGAGACGCT GCTGCCGCCG AGTTAG
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Protein sequence | MTDWPRGEGM AKQIRVHDWA RTPLGPIEDW SQGLKTVVEL MLGSPLLAAI AWGPDLTVLY NDGFEAINAA RVHAPLGRPF SDVWPTAEGE EIARQLRRGE ARHTIDRFWQ LPARPERPFG WFTLSWTPIR DEAGGVLGAY LSTIETTDRI LAERALRERE EQQAFVLGLS DALRPLADPL EVQAVACRLL GEHLQADYTY YLDLYEAEGF AVIAQDFARA GLPSRAGSYP LDLVDWAIPH HEQGQPIAIT DVRTSPMVPD HCRERVLADR VVSLLGIPLL KEGRLVGALA VSMTTPREWT PAEITLATEI GERTWATMER ARAEKTAREA DIRLRTMADA APVLIWDVHS SGTIFVNDHY LDFFGVASDA VGAHVWERFL HPEDAERHLA VFREAFRQRR SFTDEARLRR ADGQYRWLSS SGRPLEDGRF VGVSIDVTER RLAEERVRRN NAVLQAINLI FSETLGASSE EELARISLDV AEELTGSAIG FMGEIDAATG RLDGLFFSDR SRARHAARAP EGGSSLPLDA LSLELAVNGL YGRVLQDGTG FIVNDPAAHP DRGGTPPDQD HDHNHVPLTA FLGVPLKQGD RTRGLIGLGN REGGYRPEDL EAAEALAPAI WHALRAKRAE LRLRESEERF RQFAEASSDV LWIRDAETLK MEFVSPALRT VYGLETDVLG SDVQRWAGHM LPEDRGRALQ NLQRVAAGQS LLNEFRIKRP SDGAFRWIRS TLFPLRDEQG RVRRIGGLSS DMTEAKLLTG HQAVLMAELQ HRVRNIMAVT RSIVARTGER AESVSEYASL VGGRLLTLAR VQALLTRSAN AGVPVATIVH DEIDAQALRE DQYDLSGPEV ELSPKAAEIL TLAVHELATN ALKYGALSVP EGRVRVRWTL FDKRGESWLG FDWAEDGVPG AETRNDGRTE HPSMTRRGFG RELIEGRLPY ELGGRGRLEI GPEGARCRLE FPLRDGASIL ETDAPQRATV SGGALDMTGE ADLSGHRILV VEDDYYLATD TARALQGAGA EVIGPCPSEE AARDALEEGA PAAALVDINL GSGPSFTLAA LLRERGVPFV FITGYDEGVI PPDFADVERL QKPVELKRVV QFVAETLLPP S
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