Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_4983 |
Symbol | |
ID | 6312064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 5338498 |
End bp | 5339127 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642653664 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_001927614 |
Protein GI | 188584169 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0953387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.300371 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGACA TAGCGGCAAG CCTCGAACGC GGACGGCCGA AGGATCTCGC CAGCGGCGCC CAGGTGCTCT CGGGCCAGCT CGGCAAGACG ATCCAGCGTC TGCGCAAGGC CTACAACCTC TCGCTTTCCG AACTCGCCGA GCAATCGGGC GTGGCGAAGT CGATCATCAG CCAGATCGAA CGCAACGAGA CCAACCCGAC GCTGGCCACG ATCTGGCGCC TGAGCCAGGC GCTCGACGTG TCGATCGAGC GGGTGCTCGC CACCTCCGAC GAGGAGCCGT TCATCGAGCG CTTCTCCCGG GCCGACACGC CGCGTCTCGT CTCCGACGAC GGCAAGGTGC GGCTGGCCAT CATCGGCTGG ATCAAGACCG TCGAGTGGCT GCAATGGTAC GACGTCACCG CCGATCCCGG CGGCGTGCTC GAATCCGACG CGCACCAACG CGGCTCGGTC GAGTCGCTGT CGGTGCTGGA GGGCAGCTTC GAGGTCGAGG TGGCCGGCGA GGTGCAGCGG GCCAATGCCG GCGAGACCCT GCGCTACCGC TGCGACCGCC CCCACAGCAT CCGCTGTCTC GGCGACGAGC CGGGCCGGGC GACGATGGTG GTGATCATGA AGGCCGCTGT GATGGAGTGA
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Protein sequence | MQDIAASLER GRPKDLASGA QVLSGQLGKT IQRLRKAYNL SLSELAEQSG VAKSIISQIE RNETNPTLAT IWRLSQALDV SIERVLATSD EEPFIERFSR ADTPRLVSDD GKVRLAIIGW IKTVEWLQWY DVTADPGGVL ESDAHQRGSV ESLSVLEGSF EVEVAGEVQR ANAGETLRYR CDRPHSIRCL GDEPGRATMV VIMKAAVME
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