Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_4957 |
Symbol | |
ID | 6311027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 5299684 |
End bp | 5300592 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642653638 |
Product | porin |
Protein accession | YP_001927588 |
Protein GI | 188584143 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.100669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAAGC TTCTCACCTC TCTCGCCGCC TTCACGGCGA TGACCGCCGC GGCCACCGCC GCCGACCTGC CGCGCCGCGC CGCTCCGCCG GTCTTCACCC CCGTTCCGGT GTTCACCTGG ACCGGTTTCT ACGCTGGTTT CAACGCCGGT TACGGCTTCG GCGTCGAGGA CTCCCTGGCT CCGACGCAGG TCGTCACGAT CGATCGGCGC GTCGTCGGCG GTCCGGTCGG CGCGATCGCC GGCTTCGCCT TCGACAACGG CGGCCGCAGC GACGGCTTCG TCGGCGGTGG TCAGATCGGC TACAACTATC AGTTCACCCC GGGCTCGGGT GTCGTGATCG GTATCGAAGC CGACGCTCAG TACGCCGACC TCGGCGGCCG CTTCGGCCGT AACGGCCTCT GCGGCACCGG CGGCATCGCC TGCGCCGTGA CCCCGGGCGC CTTCGTGCAG CCGGGCGTGA CCCTGATCAA CCCGACCGGT CTCCAGGGCC TCGACTTCTT CGGTACCGTC CGCGGCCGCA TCGGTTACGC CTTCGACCGC GTCCTGTTCT ACGGCACCGG CGGCTTCGCC TACGGCAGCT TCGGTGGCGG CCGCGCCGTC GACACCGACG ACTTCAAGAC CGGCTACGCC GCTGGTGGTG GTGTCGAGTA CGCGCTCCCG ACCGACTCGT TCCTGAACTT CTTCCGCTCC TCGGCGGTGA CGATCAAGGT CGAAGGTCTG TACGTGAACT TCGATGGCAA CAACAGCCGC TACGGCTTCG CCAACGCCAA CGGCACCATC GTGACCGCGA CCCCGCTGAC CGCGGCCGGC CCGATCTCGC CCTCGACCAT CCTGAACAAC ACCGCCCGCC GCGACAACGA CTTCGCCGTC ATCCGCGCCG GCCTGAACTA CAAGTTCGGC AGCTACTAA
|
Protein sequence | MKKLLTSLAA FTAMTAAATA ADLPRRAAPP VFTPVPVFTW TGFYAGFNAG YGFGVEDSLA PTQVVTIDRR VVGGPVGAIA GFAFDNGGRS DGFVGGGQIG YNYQFTPGSG VVIGIEADAQ YADLGGRFGR NGLCGTGGIA CAVTPGAFVQ PGVTLINPTG LQGLDFFGTV RGRIGYAFDR VLFYGTGGFA YGSFGGGRAV DTDDFKTGYA AGGGVEYALP TDSFLNFFRS SAVTIKVEGL YVNFDGNNSR YGFANANGTI VTATPLTAAG PISPSTILNN TARRDNDFAV IRAGLNYKFG SY
|
| |