Gene Mpop_4940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4940 
Symbol 
ID6311127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5276680 
End bp5277426 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content70% 
IMG OID642653621 
ProductNucleotidyl transferase 
Protein accessionYP_001927571 
Protein GI188584126 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.291574 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG AGCAGAATCC CAAGAAGATC ACCCGCGCCT TCGTGCTCGC GGCGGGCCTG 
GGCAAGCGCA TGCGCCCGAT CACCGCGACG CTGCCCAAGC CCCTGGTCGA GGTCGCCGGC
AAGGCGCTGA TCGACCACGC CCTCGACCGG GCGGCGGCGG GGGGCATCGA GACGGCGGTG
GTCAACGTCC ACTGGCTCGC CGACCTGATG GAGGGTCACC TCACCCATCG CACGGGCGCG
CCGGAGATCA TCGTCTCCGA CGAGCGCGAC GCACTGCTCG AGACCGGCGG CGGCGTGAAG
CGGGCGATCG ACCGGTTCGG GCACACGCCC TTCGTGGTGT TCAACTCGGA TTCGTTCTGG
CTGGAGGGGC CGCGGCCCAA TCTCGGCCGG CTGATCGAGG CCTGGGATCC GGACACGACC
GACATCCTGC TCCTCGTCGC CCCGACCGCG ACGAGCCTCG GCTACGACGG GGCGGGCGAT
TTCTACATGG ACGCGGACGG CCGCCTGTCG TGGCGCGGTG AGCGCGAGGT CGCGCCCTTC
ATCTATGCCG GCGTGGCGAT CCTGAAGCCG GAGCTGTTCG CCGACACGCC GGAGGGTCCG
TTCTCGCTGA CCCTGCTCTT CGACCGGGCG ATCCGACGCA ATCGCCTCAA GGGTCTGCGC
CTCGACGGGC AGTGGCTGCA TGTCGGCACG CCGGAGGCGA TTCAAGCCGC CGAGGCGCGG
GTGCGGGACA GCGCGCGGAT CGTTTGA
 
Protein sequence
MSDEQNPKKI TRAFVLAAGL GKRMRPITAT LPKPLVEVAG KALIDHALDR AAAGGIETAV 
VNVHWLADLM EGHLTHRTGA PEIIVSDERD ALLETGGGVK RAIDRFGHTP FVVFNSDSFW
LEGPRPNLGR LIEAWDPDTT DILLLVAPTA TSLGYDGAGD FYMDADGRLS WRGEREVAPF
IYAGVAILKP ELFADTPEGP FSLTLLFDRA IRRNRLKGLR LDGQWLHVGT PEAIQAAEAR
VRDSARIV