Gene Mpop_4934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4934 
Symbol 
ID6311335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5270220 
End bp5271119 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content75% 
IMG OID642653615 
Productdiacylglycerol kinase catalytic region 
Protein accessionYP_001927565 
Protein GI188584120 
COG category[I] Lipid transport and metabolism
[R] General function prediction only 
COG ID[COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.212819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.157048 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCG TCCTCGTCGT CAACGCCGCG TCGGGCGCCT TCGCCGACGG TCTGAGGCCG 
GACGCGATCC GCGCACGCCT GACGGCGGCG GGCCTCGACC TCGCGCCGGA GCCGGACGAG
AGCCTTGGCC TGCCGGAGCG CCTGCGGGCC GCGCTCCGCA CCGAGGGCGT CGGGGCGGTG
GTGGTGGCGG GCGGCGACGG CACGCTCAAC GGCGCGGCCG GCGTGCTGGC GGGAAGCGGC
GTGGCGCTCG GCATCCTGCC CCTCGGCACC ATGAACCTGC TGGCCAAGGA TCTCGGCATC
CCGCTCGATC TCGATGGCGC CATCGCCGTG CTGCGGGCCG GGCATGCGCG CGCCATCGAT
GTCGGCCGCG TCAACGGCCA CGTCTTTCTC ATCAACTCGG TGCTCGGCAT GCCCGCCCGC
ATGGCCCGCC ACCGCGAGGG GTTCCGCGGG CGGCGCCTCG GCCCGTCGGC CCTGCTGCGT
CTGGCGGTGG CGATCCTGCG CCATCTCGGC CCCTACCCGC CCCTCTCCGC GGTGATCTCG
GAGAGCGGAC GGCGGACACG GCGGCGCGTC CGCCTGCTCG CGGTCATCAA CAACGACTAC
GCGCAAGCAC CGGGAAAGAT TCTGGAGCGG AGCCAGGTCG ATGGCGGCGA GTTGATGCTC
TACATCGCCC GCCGGCTCTC GCCGTGGCGC CTCGCCCGGC TGGCGCTCGG GTTCGGGCTC
GGCTGCTGGC GCGACGGGCC GGATCTGGAG CGCCGCGGCG CGACCCGGTT CGCCGTCGCC
GCCCGGCGGC GGGCGCTGCG GGTGATGAAC GATGGAGAGG TTCGCTTGAT CGCCCCGCCC
CTGCGCTACC GCCTGATGCC CCGCGCGCTC ACCGTGATCG TGCCGGAGCC GGTCCGGTGA
 
Protein sequence
MRIVLVVNAA SGAFADGLRP DAIRARLTAA GLDLAPEPDE SLGLPERLRA ALRTEGVGAV 
VVAGGDGTLN GAAGVLAGSG VALGILPLGT MNLLAKDLGI PLDLDGAIAV LRAGHARAID
VGRVNGHVFL INSVLGMPAR MARHREGFRG RRLGPSALLR LAVAILRHLG PYPPLSAVIS
ESGRRTRRRV RLLAVINNDY AQAPGKILER SQVDGGELML YIARRLSPWR LARLALGFGL
GCWRDGPDLE RRGATRFAVA ARRRALRVMN DGEVRLIAPP LRYRLMPRAL TVIVPEPVR