| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4913 |
|---|
| Symbol | |
|---|
| ID | 6310547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 5250701 |
|---|
| End bp | 5252260 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642653594 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_001927544 |
|---|
| Protein GI | 188584099 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.849952 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.190693 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCATCA CCGTCTACGT CCCGCAGGAC GCCGTCGCCC TGGGGCTGGG CGCCAACCGC
GTCGCCCGCG CGATCTTCGC CGGAGCCGAG CGCCGCGGCC TCGACGTGCG CATCGTCCGC
ACCGGCACCC GCGGCCTGCT CTGGCTCGAG CCGATGGTCG AAGTCGCCAC CTCCGAGGGC
CGCATCGCCT ACGGCCCGGT GACGCCGGCC GATGTCGAGA GCCTGCTCGA CGCCGGCTTC
GTCGAGGGCG GCGCGCACGC GCTTCGCCTC GGCAAGCCCG AGGAGATGCC GTTCCTCGCG
CGTCAGCACC GCCTCACCTT CCACCGCTGC GGCGTGGTCG ATCCGGTCTC CGTCGAGGAT
TATCGGGCGC ATGGCGGCTA CCGCGGTCTC GAAGCGGCGC TGAAGCTCGA CGCCGAGGGC
GTCGTCGCCC AGGTGCGCGA TTCGGGTCTG CGCGGGCGCG GCGGCGCCGG CTTTCCGGCG
GGCATCAAGT GGAACACGGT GATGCTGGCC CAATCGGACC AGAAATACGT GGTCTGCAAC
GCCGACGAGG GCGATTCCGG CACCTTCGCC GACCGGATCA TGATGGAGGG CGACCCCTTC
AACCTGATCG AGGGCATGAC CATCGCCGCC GTCGCCACCG GCGCGACGCG GGGCTACATC
TACTGCCGCT CGGAATATCC GCAGAGCTTC AAGACCCTGC GCGACGCGAT CGCCAACGGC
GTCAAGGCCG GCGTGCTGGG CGACAACATC CTGGGCAGCG GCAAGAGCTT CCATCTGGAA
GTTCGGCTGG GCGCCGGCGC CTATATCTGC GGCGAGGAGA CCTCGCTGCT GGAAAGCCTC
GAGGGCAAGC GCGGCATCGT CCGGGCCAAG CCCCCGATCC CGGCGCTGAA GGGCTTCCTC
GGCAAGCCGA CGCTGGTCAA CAACGTCATG ACCTTCACGG CCGTGCCGTG GATCATGGAG
CACGGCGCCA AGGCCTATGC CGAGTACGGC ATGGGCCGCT CGCTCGGCAC CCTGCCGATC
CAGCTCGCCG GCAATATCAA GCATGGCGGG CTGATCGAAT ACGCCTTCGG CATCACCATC
CGTCAGGTGA TCGACGAGTT CGGCGGCGGC ACCGCCTCGG GCCGTCCGGT CCGCGCAGTG
CAGGTCGGCG GCCCGCTCGG CGCCTACTTC CCCGATGAAC TGCTCGACAC GCCGCTCGAC
TACGAGGCGA TGGCGGCCAA GAAGGGCCTC GTCGGCCATG GCGGCATCGT CGTGTTCGAC
GACACCGTCG ATATGGCCAA GCAAGCCCGC TTCGCCTTCG AGTTCTGCGC CACCGAATCC
TGCGGCAAGT GCACCCCCTG CCGCGTCGGC GCCACCCGCG GCGTCGAGAC CATGGACAAG
GTCATCTCCG GCATCCGTCC GGAGGCCAAT CTCAAGCTCG TCGAGGATCT CTGCGAGATC
ATGACCGACG GCTCGCTCTG CGCCATGGGC GGGCTGACGC CGATGCCCGT GATGAGCGCC
ATCACCAACT TCCCCGAGGA TTTTCGGCGC GCGGGCGATC TGCCCGTCGC GGCCGAGTGA
|
|---|
| Protein sequence | MSITVYVPQD AVALGLGANR VARAIFAGAE RRGLDVRIVR TGTRGLLWLE PMVEVATSEG
RIAYGPVTPA DVESLLDAGF VEGGAHALRL GKPEEMPFLA RQHRLTFHRC GVVDPVSVED
YRAHGGYRGL EAALKLDAEG VVAQVRDSGL RGRGGAGFPA GIKWNTVMLA QSDQKYVVCN
ADEGDSGTFA DRIMMEGDPF NLIEGMTIAA VATGATRGYI YCRSEYPQSF KTLRDAIANG
VKAGVLGDNI LGSGKSFHLE VRLGAGAYIC GEETSLLESL EGKRGIVRAK PPIPALKGFL
GKPTLVNNVM TFTAVPWIME HGAKAYAEYG MGRSLGTLPI QLAGNIKHGG LIEYAFGITI
RQVIDEFGGG TASGRPVRAV QVGGPLGAYF PDELLDTPLD YEAMAAKKGL VGHGGIVVFD
DTVDMAKQAR FAFEFCATES CGKCTPCRVG ATRGVETMDK VISGIRPEAN LKLVEDLCEI
MTDGSLCAMG GLTPMPVMSA ITNFPEDFRR AGDLPVAAE
|
|---|
| |