Gene Mpop_4909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4909 
Symbol 
ID6310543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5247153 
End bp5247908 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content74% 
IMG OID642653590 
ProductHAD-superfamily hydrolase, subfamily IIB 
Protein accessionYP_001927540 
Protein GI188584095 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1877] Trehalose-6-phosphatase 
TIGRFAM ID[TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.379995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.389107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGA CCGCAGACTA CGCCCTGTTC CTCGATTTCG ACGGCACCCT GGTCGAGATC 
GCCCCGCGGC CCGACGCGGT GCAGGTCGAT CCCAGCCTCG TGCCCGCCCT GGAGCGGCTG
CGCGAACGGC TCGGCGGTGC GCTCGCCATC GTCACCGGCA GGCCTGTCGC AGTGATCGAC
GACTTCCTGA ACCCCGCCCG GTTCGACGTC GCCGGTCTGC ACGGGGTCGA GCGGCGGGTG
GACGGCACCC TGAGCGGCGG ACGGCCGGAG GATCATCCGG ACCTGCGCGC GGGCGTCGAG
CGGCTGCACG CGGAGACGGC CCGCTACGAA TCGGTGCTGA TCGAGGACAA GGGCGCCTCG
GTGGCGGTGC ACTGGCGGCT CGCCGCGCCG GGCGACGCGC AGGCGGCGGA AGAGATCGTC
AAGGCGGTCG CGGCCGATCT CGGCTCGGCC TACCGGCTCC AGCTCGGCAA GGCCGTCGGC
GAGATCGTGC CGGCCGCCGC CACCAAGGGC CACGCCATCC GCGCCTTCCT CGAGGCCGCC
CCCTATACTG GCCGGCGCGC CATCTTCCTC GGCGACGACC GCACCGACGA GATCGCCTTC
GCCTCGGTCA ACGAGGATGG CGGCATCAGC GTGCGCATCG GCGACGGCGA GACGGTGGCG
AGCCGGCGCC TGGCCGACCC GGCCGTGGTG CGTGCGCTGA TCGCCGCCTG GGCCGAGGGC
GCACCGATCG ACCCGGACGC GCTGCCCGCG GCCTGA
 
Protein sequence
MSETADYALF LDFDGTLVEI APRPDAVQVD PSLVPALERL RERLGGALAI VTGRPVAVID 
DFLNPARFDV AGLHGVERRV DGTLSGGRPE DHPDLRAGVE RLHAETARYE SVLIEDKGAS
VAVHWRLAAP GDAQAAEEIV KAVAADLGSA YRLQLGKAVG EIVPAAATKG HAIRAFLEAA
PYTGRRAIFL GDDRTDEIAF ASVNEDGGIS VRIGDGETVA SRRLADPAVV RALIAAWAEG
APIDPDALPA A