Gene Mpop_4872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4872 
Symbol 
ID6310987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5204276 
End bp5205148 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content72% 
IMG OID642653552 
Productextracellular solute-binding protein family 3 
Protein accessionYP_001927503 
Protein GI188584058 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.115959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCCC TGTCCCGCCG CGGCTTCGCC GCCGCCCTCG CGGGCCTGAC CGTCGCCGGA 
GCGTTCGCGG GCGGGCCGGT ATTCGCGCGT CCCTTCGACG AGGTGATGGC CTCCGGCGTT
CTGCGCGTGG CGATCTACGA CGACAACCGC CCCTTCTCCG AGGCGGCACA GGCGGGCCCC
CGCGGCATCG ATGCGGACAT CGCACGGGCG ATCGCCGAGC GGCTCAAGCT GAAGCTCGAT
CTGCGGGTGG TGGATGCCGG CGAGAACGTC GACGGCGACT TCCGGCTCAA CCTGTGGCGC
GGCGATCTCG CGGGAACGCC GCTCGCCGAC CTGATGCTGC ACGTCCCCCA CGACCGCATC
CTCGCGACCC GCAACGAGCA GATCTTCCTG ACCAATCCCT ATTTCGAGCA GCGCCTCGCC
TTCGCCTACC ATCGCGGCCG GATCGAGGGC TTCGAGGGCG TGCGCGACTT GGAGGGCAAC
GCCGTCGCGG TCGAGGGCAC CAGCGCCTCC GACAGCCTGC TGATGAACGC CGAAGGCGGC
CGTTTCCGCG GTCAGGTCCG GCATTTCCGC AGCTTCGACG AAGCGGCGAA AGCCTATCTC
GCGGGCGAGA CCCCGATCCT CGCCGGCACC CGCGCGGGCA TCGAGGCGGC GCTCGCCGCG
GCCGGCGTCG CGGGGGAGGA CAACCCCGTG GTCGAGGTGC CGATCCCCGG CCTCGTGCGG
ACGCGATGGG AGATCGGCGG CGCGGTGCGC AGCGATTCCC GCGACCTCGC CTATGCGGTC
GGCGACGCCC TCGCCGCCCT GGCGCAGGAG GGACGCCTCA AGACGATCTG CGCGACCTAC
GGCGTCACCT ACGCGCCGCC GCAGGGGTAT TGA
 
Protein sequence
MRALSRRGFA AALAGLTVAG AFAGGPVFAR PFDEVMASGV LRVAIYDDNR PFSEAAQAGP 
RGIDADIARA IAERLKLKLD LRVVDAGENV DGDFRLNLWR GDLAGTPLAD LMLHVPHDRI
LATRNEQIFL TNPYFEQRLA FAYHRGRIEG FEGVRDLEGN AVAVEGTSAS DSLLMNAEGG
RFRGQVRHFR SFDEAAKAYL AGETPILAGT RAGIEAALAA AGVAGEDNPV VEVPIPGLVR
TRWEIGGAVR SDSRDLAYAV GDALAALAQE GRLKTICATY GVTYAPPQGY