Gene Mpop_4828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4828 
Symbol 
ID6310475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5153972 
End bp5154721 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content75% 
IMG OID642653507 
Producthemolysin A 
Protein accessionYP_001927459 
Protein GI188584014 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.596006 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGCG AGCGGCTGCG GGCCGACCGG TTCCTGGTCG AGCACGGGCA TTTCCGCAGC 
CGGGCGCAGG CGCGGGCGGC GATCGAAGCC GGCCTCGTCC GCGCCGACGG CTCCCTCGTC
ACCCGCCCCT CGGACCTCAT CGGCGCGGGC GCGCGGATCG AGGCCTCGGC CCCCCACCCC
TACGTCTCCC GCGGCGGCCT CAAGCTTGCA GCCGCGCTCG ACGCGTTCGG CCTCGACCCC
GCCGGCCTGC GCTGTCTCGA TGTCGGCGCC TCGACCGGCG GCTTCACCGA TGTGCTGCTG
CGGCGCGGCG CCGCCCATGT CCACGCCGTC GATGTCGGCC GCGACCAGCT CGACGCCGCC
TTGCGCGCCG ACCCGCGGGT GACCAGCTTG GAGGGCACCG ACATCCGCAC CCTCGCCCCC
GGCGCGATCG AGCCCGCGCC GCGGCTCGCC ACCATCGATG TCAGCTTCAT CGGCCTGCGG
CTGGTCCTGC CGGCGGTGGC GGCGCAGCTC GCCGGGGAGG CGGCGCTCGC CGCGCTGATC
AAGCCGCAAT TCGAGGCCGG TCGCGAGCGG GTCGGGCGCG GCGGGATCGT GCGCGACGCG
GAGGTTCATG CCGAGGTCTG CGAGGGCGTG CGCGCCGTGC TCGTCGGCCT CGGCTTCACC
GTATCGGGGC CGATCCCCTC CCCGATCGAG GGCGGCGACG GCAACCGCGA GTTTCTGGTC
GCCGCGAGGC GCTCCGCTCA TGATGAATGA
 
Protein sequence
MTGERLRADR FLVEHGHFRS RAQARAAIEA GLVRADGSLV TRPSDLIGAG ARIEASAPHP 
YVSRGGLKLA AALDAFGLDP AGLRCLDVGA STGGFTDVLL RRGAAHVHAV DVGRDQLDAA
LRADPRVTSL EGTDIRTLAP GAIEPAPRLA TIDVSFIGLR LVLPAVAAQL AGEAALAALI
KPQFEAGRER VGRGGIVRDA EVHAEVCEGV RAVLVGLGFT VSGPIPSPIE GGDGNREFLV
AARRSAHDE