| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4815 |
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| Symbol | |
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| ID | 6310216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 5142944 |
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| End bp | 5143666 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642653494 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001927446 |
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| Protein GI | 188584001 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0328303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0791888 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTCA CCGGCGCCAG CCGCGGCATC GGGCATGCCA CCGTCAAGCG CTTCTCCGCC
GCGGGCTGGC GGGTCATCAC CTGCTCGCGC CATCCCTTCC CCGAGAACTG CCCGTGGGAG
ATGGGGCCGG AGGATCACCT TCAGGTCGAT CTCGCCGACG CGCAGGACAC CGTGCGCGGC
GTGCGCGAGG TGGCCGAGCG GCTCGCCGCC GAGGGCGGCC TGCTGCACGC GCTCGTCAAC
AATGCCGGCA TCTCGCCCAA GGGCCCGGAG GGCGAGCGGC TCGGGGCGCT GACCACCGAG
TACGAGGACT GGGCCCGCGT CTTCCAGGTG AACTTCTTCG CGCCGATCCT GCTCGCGCGG
GGCCTCACCG ACGAGCTGAC CCGGGCGCGC GGCTCTATCG TCAACGTCAC CTCGATCGCC
GGCTCGCGGG TCCACCCCTT CGCCGGGGCG GCCTACGGCA CCTCGAAGGC GGCGCTCGCC
GGCCTTACCC GCGAGATGGC CGCGGATTTC GGGCCGCTCG GCGTGCGCGT GAACGCGATC
TCGCCGGGCG AGATCGACAC CTCGATCCTG TCGCCGGGCA CCGACAAGCT GGTGCAGCAG
ATCCCGCAGC GCCGGCTCGG CACCCCGGAC GAGGTCGCCA AGGCGATCTA CTTCCTCTGT
ACCGAGGCCT CCTCCTACGT GAACGGCGCC GAACTCCACA TCAACGGCGG CCAGCATGTC
TGA
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| Protein sequence | MLLTGASRGI GHATVKRFSA AGWRVITCSR HPFPENCPWE MGPEDHLQVD LADAQDTVRG
VREVAERLAA EGGLLHALVN NAGISPKGPE GERLGALTTE YEDWARVFQV NFFAPILLAR
GLTDELTRAR GSIVNVTSIA GSRVHPFAGA AYGTSKAALA GLTREMAADF GPLGVRVNAI
SPGEIDTSIL SPGTDKLVQQ IPQRRLGTPD EVAKAIYFLC TEASSYVNGA ELHINGGQHV
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