Gene Mpop_4801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4801 
Symbol 
ID6310269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5130464 
End bp5132944 
Gene Length2481 bp 
Protein Length826 aa 
Translation table11 
GC content77% 
IMG OID642653480 
ProductATP-dependent helicase HrpB 
Protein accessionYP_001927432 
Protein GI188583987 
COG category[L] Replication, recombination and repair 
COG ID[COG1643] HrpA-like helicases 
TIGRFAM ID[TIGR01970] ATP-dependent helicase HrpB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.510158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCGC CTGTCCCCGC GCTCCCGATC GAGGCCGCCC TTCCCGCCCT GCGCGCGGCC 
CTGTCCGAAC GCGCCTCCGC CGTGCTCGTG GCCCCGCCCG GCGCCGGCAA GACCACGCGC
GTGCCGCTCG CCCTGCTCGA AGAGTCCTGG CTCGGGGCGC AGAAAATCAT CCTGCTGGAA
CCCCGGCGGC TCGCGGCGCG GGGCGCGGCT GAGCGCATGG CCGCGACTTT GGGTGAGCGG
GTCGGCGAGA CGGTCGGCCT GCGGGTGCGG CTCGGCTCGA AGATTTCGGC CCGCACCCGG
ATCGAGGTCG TCACCGAGGG CGTGTTCACC CGGATGATCC TCGACGATCC GGAACTGGTC
GGCATCGGCG CCGTGCTGTT CGACGAGTTC CACGAGCGCT CCCTCGACGC CGACCTCGGG
CTGGCCTTCG CCCTCGACGC GCAGGGCGCG CTGCGGGAGG ACCTGCGGAT CCTCGCCATG
TCCGCGACCC TCGACGGGGC CCGCGTCGCG GGGCTTCTCG GCGACGCGCC GGTGGTGGAA
TCGGAGGGGC GTGCCTTTCC CGTCGAGACC CGCCATCTCG ACCGCGAGGG CGGCGAGCGC
ATCGAGGATG CGATGGCCGC CGCGATCCTG CGGGCGCTGC GGGCCGATCC CGGCTCGGTC
CTGGCCTTCC TTCCGGGCCA GGCGGAGATC CGCCGCACCG CCGAGCGGCT GGCGGAGCGC
CTGCCCGACG ACACCGACCT CGCCCCCCTC TACGGCGCGC TCACCCCGGG CGAGCAGGAC
CGGGCGGTGG CCCCGGCGCC GCCGGGGCGG CGCAAGGTGG TGCTGGCGAC CTCCATCGCC
GAGACCTCGC TGACGATCCA GGGCGTGCGC ATCGTCGTCG ATTCCGGGCT CGCCCGGGTG
CCGCTCTACG AGCCCGGCAA CGGCATGACC CGGCTCGTCA CCGCGCGGGC CTCGCGTGCC
TCGGTCGACC AGCGCCGGGG CCGCGCCGGG CGCACCGAGC CGGGGGTGTG CTGGCGGCTC
TGGCCGGAGG CGGCGACCGC TTCCCTCGAA CCCTTCGCCC GGCCGGAGAT CCTGTCCGCC
GACCTGGCCG GTCTGACCCT CGACTGCGCC GCCTGGGGCG TGACCGACCC GACCGCCCTG
CCCTTCCTCG ACCCGCCGCC GGTGCCGGCG CTCGCGGAGG CGCGGGCGAT GCTGACCGAT
CTCGGCGCCC TCGATCCCGA CGGGCGGCTC ACCGCCACCG GCCACACCCT GCGCAGCCTG
CCGCTGCCGC CCCGGCTCGC CCGGATGGTC GCCCGCGCCG CCGAATCCGG CCAGGCCCGC
GCCGCCGCGG ATCTCGCCGC CGTGCTGGTC GAGCGCGGGC TGGGCGGGGA TGCGGTCGAT
CTCGCCGAGC GCCTGGACCG CTTCCGCCGC GACCGTGGCG GCCGGGCCGC CGACATGCGC
CGCCTCGCCG AGGGTTGGGC GCGGCAGGCG GCCAAGGCAG CGGGGGCCGT GGCCGAGCCC
GATCCGGCGC TTGCCGAGCC CGGCGCCCTG CTGGCGCTCG CCTATCCCGA CCGGGTGGCG
CGGGCGCGGG GCCGCGACGG CGCCTTCCTG ATGGCCAATG GCCGCGCCGG CCTTGTCGAT
CCGGCGAGTC CGCTCGCCCG CGAGCCCTTC ATCGTCGTCG CCGACCTCAC CGGCGCTGCG
GCCTCCGCCC GCATCCTGTC TGCGGCCGCG ATGTCTTCCG AGTCCATCGA CGCGCTGTTT
TCCGACCGCA TCGCGACCGT GCGCAGCGTC AGCTTCGACG GGCAGGCCCG TGCGCTCCGC
GCCCGCGAGG GGCGCCGGCT CGGGGCCGTC ACGCTGGACG AGCGCACGAT GCCCGTTCCC
GCCGACGCGG AGGCGGCGCG GGTGCTGGCC CGCGGCATCG CCAGCCTCGG CCTCGACCGC
CTGCCCTGGA CGCCCGCCCT GGCGCAGTGG CGGGCGCGGA TCCGCTTCCT CCACGAGGCC
GAGGGCGGGG AATGGCCGGA CCTCTCCGAC GCGGCCTTGG CCGAGAGCGT CGAGGACTGG
CTGGCGCCGT CCCTCGTCGG GCGCACCGCG CTGGCGGCGG TCACCGCCGA CGATCTCGGC
CAGGCCCTGC AGGGCCTGCT GCCCTGGAGC CTGCGCGCCC GCCTGGAGGC GGAGGCGCCG
AGCCATATCG AGGTGCCGAC GGGCTCGCGC ATCCCGGTCG ATTACGAATC CGGCCCCGAG
CCGGTGCTGG CGGTGCGGGT GCAGGAGCTG TTCGGCCTCG ACCGGCACCC GACCCTCGGC
GGGGGCCGCG TGCCGCTGGT GCTCCACCTG CTCTCGCCGG CCCACCGCCC GATCCAGATC
ACCCGCGACC TGCCGGGCTT CTGGCGCGGC TCCTGGGCCG CGGTCCGCTC CGAGATGCGC
GGCCGCTACC CGCGCCACCC CTGGCCGGAG GACCCGCTCA GCGAGGCCCC GACCCGGCGG
GCGAAGCCGA GAGGGACGTA A
 
Protein sequence
MSSPVPALPI EAALPALRAA LSERASAVLV APPGAGKTTR VPLALLEESW LGAQKIILLE 
PRRLAARGAA ERMAATLGER VGETVGLRVR LGSKISARTR IEVVTEGVFT RMILDDPELV
GIGAVLFDEF HERSLDADLG LAFALDAQGA LREDLRILAM SATLDGARVA GLLGDAPVVE
SEGRAFPVET RHLDREGGER IEDAMAAAIL RALRADPGSV LAFLPGQAEI RRTAERLAER
LPDDTDLAPL YGALTPGEQD RAVAPAPPGR RKVVLATSIA ETSLTIQGVR IVVDSGLARV
PLYEPGNGMT RLVTARASRA SVDQRRGRAG RTEPGVCWRL WPEAATASLE PFARPEILSA
DLAGLTLDCA AWGVTDPTAL PFLDPPPVPA LAEARAMLTD LGALDPDGRL TATGHTLRSL
PLPPRLARMV ARAAESGQAR AAADLAAVLV ERGLGGDAVD LAERLDRFRR DRGGRAADMR
RLAEGWARQA AKAAGAVAEP DPALAEPGAL LALAYPDRVA RARGRDGAFL MANGRAGLVD
PASPLAREPF IVVADLTGAA ASARILSAAA MSSESIDALF SDRIATVRSV SFDGQARALR
AREGRRLGAV TLDERTMPVP ADAEAARVLA RGIASLGLDR LPWTPALAQW RARIRFLHEA
EGGEWPDLSD AALAESVEDW LAPSLVGRTA LAAVTADDLG QALQGLLPWS LRARLEAEAP
SHIEVPTGSR IPVDYESGPE PVLAVRVQEL FGLDRHPTLG GGRVPLVLHL LSPAHRPIQI
TRDLPGFWRG SWAAVRSEMR GRYPRHPWPE DPLSEAPTRR AKPRGT