Gene Mpop_4788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4788 
Symbol 
ID6310278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5116613 
End bp5117536 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content72% 
IMG OID642653467 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001927419 
Protein GI188583974 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.983667 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCCC TCATCCTGCG CCGGATCGCC CAGAGCCTGC CGACCCTGTT CCTCGTGGTG 
GCGGGAAGCT TCTTCCTGAT CCGGCTGGCG CCGGGCGGCC CGTTCGATCT GGAGCGGCCC
CTGCCGCCGG CGGCGATGGA GAACCTGCGC CGGGTCTACG GCCTCGATCA GCCGCTGATC
GTGCAGTTCG GGCGCTACCT CCTGAGTCTG TTGCAGGGCG ATCTCGGCCC CTCCTTCACC
TTTCGCGATC TCACCGTCAC AGACCTGTTC GCCCGCGGCC TGCCGGTCTC GCTGACGCTC
GGCAGCCTCG CGCTCGTTCT CGCGCTGGGC CTCGGCTTGG CGCTCGGGAG CCTCGCCGCG
TTCGACCGCG GCGGGATCGC CGACCGGGGG GTGGGGCTCG CCGCCTCCCT CGGGCTCGCG
GTGCCGAACT TCGTCACCGC GCCCCTGCTC CAGATCGTGT TCGGCCTCGG GCTGGCGTGG
CTCCCCATCG GCGGCTGGGC CGACGGGAAT CCGAGAAACC TCGTCCTGCC GGTCCTCACG
CTGGCCCTGC CCCACGCGGC GGGCATCGCC CGCCTCACCC GCGCCTCGCT CGGCGAGGTG
CTGATCCAGC CGCATATCCG CACGCAGCGC GCCATGGGCC TGTCGCGGGC CCGCATCGCC
CGGCACGCGC TGCGCGGGGC GCTGCTCCCC GTCGTCGCGA CGTTGGGGCC GCTGGCGGCG
GGGCTGATGA CCGGCTCGGT CGTGGTCGAG ACCATCTTCG GCCTGCCCGG GATCGGACGC
TACTTCGTCG AGGGCGCGCT CAACCGCGAC TACACCCTGG TGATGGGCAC GGTGGTGCTG
GTGGCGGTGC TGGTGATCGT CTTCAACCTG ATCGCCGACC TGATCGCCGC CGCCCTCGAT
CCGCGGGTGA GGCTCTCGGC ATGA
 
Protein sequence
MIALILRRIA QSLPTLFLVV AGSFFLIRLA PGGPFDLERP LPPAAMENLR RVYGLDQPLI 
VQFGRYLLSL LQGDLGPSFT FRDLTVTDLF ARGLPVSLTL GSLALVLALG LGLALGSLAA
FDRGGIADRG VGLAASLGLA VPNFVTAPLL QIVFGLGLAW LPIGGWADGN PRNLVLPVLT
LALPHAAGIA RLTRASLGEV LIQPHIRTQR AMGLSRARIA RHALRGALLP VVATLGPLAA
GLMTGSVVVE TIFGLPGIGR YFVEGALNRD YTLVMGTVVL VAVLVIVFNL IADLIAAALD
PRVRLSA