Gene Mpop_4776 details

Gene Information

• Locus tag: Mpop_4776
• ID: 6310287
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylobacterium populi BJ001
• Kingdom: Bacteria
• Replicon accession: NC_010725
• Strand: +
• Start bp: 5099260
• End bp: 5102520
• Gene Length: 3261 bp
• Protein Length: 1086 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 642653455
• Product: PAS/PAC sensor hybrid histidine kinase
• Protein accession: YP_001927407
• Protein GI: 188583962
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.108623
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 31
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGACCACCG CACCCTCCTT CCTCGCCGGC GGCGGCGCGG CCGGCGCCCT GATGCGCGGA 
CTCGACTGGG CGGCGACGCC GCTCGGGCCA CCCGAGACGT GGCCCGCGGC GCTCAAGACC 
CTGGTCGGCG TGATGCTCGG CTCGCAGCAG CCGATGCTGA TCGTCTGGGG CGAGGCGCAT 
GTCACGCTCT ACAACGACGG CTACGCCCCG ATGTGCGGCG CGCGCCACCC GAAGGCGCTC 
GGCCGGCCCT TCGACGAGGT CTGGCACGAC ATCTGGGATC AGGTGGAGCC GATTCTGTCG 
CGGGCCTATG CCGGCGAGGC CACGCATATG GAGGACATCA CCTTCACGAT GCACCGCAAC 
GGCTACCCGG AGGAGACGCA CTTCGCCTTC GGCTACACGC CGGTGCGGGG CGAGGACGGC 
ACGGTGGCGG GCATGTTCTG CGCCTGCTCC GAGACCACCG CCGCGGTGCG CGCCGGACGG 
CAGATGCAGG CCGAGCGCGA GCGCTTCGCC CGGCTGTTCG AGCAGGCGCC GAGCTTCGTC 
GCGGTGCTCG ACGGGCCCCA CCACGTCTTC GCCTTCGCCA ACGCCGCCTA TCGCGGGCTC 
GTCGCCCACC GCGACATTCT CGGCAAGCCG GTGCGCGCGG CCCTGCCGGA GGTCGAGGGC 
CAGGGCTTCT TCGAGCTGCT CGACGAGGTG TACGCCACCG GCCGCAGCCA CACCGCGCAC 
GGGGCGCCGG TGACCCTCCT GCGGGTGCCC GGCGGCGTGC CCGAGCAGCG CTTCCTCGAT 
TTCGTCTACC AGCCCATGCG CGACGCGTCG GGCACCATCA CCGGCGTGTT CGTCGACGGC 
TCGGACGTGA CCGAGCGGAT CACCGGCAAC GCGGCCTTGG CCGAGAGCGA GGCGCGCTTC 
CGCACCATGG CGGACGATGC GCCGGTGATG ATGTGGGTCA CCGATGCCGA CGGCGCCTGC 
CAGTACCTGA ACCGGCGCTG GTACGAGTTC ACCGGCCAGA CCGAGGCGCA GGCCCTCGGC 
CTCGGCTGGT TGGAGGCCGT CCACCCGGAC GACCGCGGCT GGTCCGGCGA GACCTTCCTG 
ACGGCCAATG CCCGGCACGA GGGCTTCAGC CTCGAATACC GTCTGCGCCG CCGCGACGGC 
GCCTATCGCT GGGCGATCGA CACCGCGAGC CCGCGCTTTG CCGCCGACGG GCGTTTTCTG 
GGCTATATCG GCTCGGTGGT CGATATCGAG GAGCGCCGCG CCGCCGAACT GGCGCTCGCC 
GAGAGCGAGG AGCGCCTGCG GCTCGCCGTC GAGAGCGGCG AGATCGGCCT GTGGGATTTC 
GATCCGCGGG CCGGCACCCT GTTCTGGCCG CCGCGGATCA AGGCGATGTT CGGGTTAGCC 
CCCGAGGCGG ACGTGACCCT CGAGGATTTC TCCGAAGGCC TCCATCCCGA CGACCGGGCG 
CGGGTCACCG CCGCCTTCGC CGCCGCCCTC GATCCCGGCA CCCGTGCCTT CTACGACGAG 
GAGTTCCGCA CGGTCGGAGG TGCGGACGGC ACGATCCGCT GGGTCGCGGC CAAGGGGCGC 
GGGGTGTTCG ATGCGGAGGG GCATTGCCTG CGCGGCGTCG GCAGCGCCAT CGACATCACC 
GCGCGAAAGG CAACCGAGGA GCGGCTCGTC GAGGCCACCC GCCGCCTCGA CGCCGTGCTC 
GACAACGCAA CTCAGGCCAT CTTCATGATG GATGAGCGCC AGCACTGCGC CTACATGAAC 
CGCGCCGCCG AGCGGCTGAC CGGCTACACT CTGGAGGAGA CGCGCGGCCA GGCGCTCCAC 
GATGTCGTCC ACCATACCCG GCCGGACGGC AGCCCCTACC CGCTCCACGA ATGCCCGATC 
GATCAGGCGT TCCCCGAGAA CAACCAGGAG CAGGGCGAGG AGATCTTCGT CCACCGCGAC 
GGCTCGTTCT ACCCCGTCGC CTTCACCGCG AGCCCGATCC GCGACGAGGG CGGGGCGCCG 
ATCGGCACCG TCATCGAGGC GCGCAACATC GAGGCGGAGC TGCGGGCCAA GGCGCAGCTG 
GAGGCCTTCA ATGCGAGCCT GGAGCAGCAG GTCGCGGCCC GCACCGCCGA ACTGATGCGC 
ACCGAGGAGG CCCTGCGCCA GTCGCAGAAG ATGGAGGCGG TGGGCCAGCT CACCGGCGGG 
CTCGCCCACG ACTTCAACAA CCTGCTCACC GGCATCACCG GCTCGCTCGA ACTGCTCCAG 
ACCCGCCTCG CTCAAGGGCG GCTCACCGAG ATCGACCGCT ACGTCAACGC CGCGCAGGGG 
GCGGCCAAGC GCGCCGCGGC GCTGACCCAC CGCCTGCTCG CCTTCTCACG GCGCCAGACC 
CTCGATCCCA AGCCCACCGA CGTGAACCGG CTGGTGATGG GGATGGAGGA GCTGCTGCGC 
CGCACCATCG GCCCCTCGAT CACCCTGGAG GTGGTGGCCG CGGGCGGGCT GTGGTCGGTG 
CTGGTCGATC CGAGCCAGCT CGAGAACGCG CTGCTCAACC TCTGCATCAA CGCCCGCGAC 
GCCATGCCGG ATGGCGGGCG CATCACCATC GAGACCGCCA ACCGCTGGCT CGACGACCGC 
GGCGCCCGGG AGCGCGACCT CGATCCCGGC CAGTACCTCT CGCTGTGCGT GACCGATACC 
GGCACCGGCA TGAGCCCCGA CGTGATCGCC AAGGCGTTCG ATCCGTTCTT CACCACGAAG 
CCGATCGGCC AGGGCACCGG CCTCGGCCTG TCGATGATCT ACGGCTTCGT GCGCCAGTCG 
GGCGGGCAGG TGCGGATCTA CTCGGAGGTC GGCCAGGGCA CGACGATGTG TCTCTACCTG 
CCGCGCCATT ACGGGGCCGC CGAGGAGCCG GATCCCGCTC CCGACCTCGC CGCCGCGCCG 
CGGGCTGAGC AGGGCGAGAC GGTGCTGATC GTCGACGACG AGCCGACGGT GCGGATGCTG 
GTGACGGAGG TGCTGGAGGA TCTCGGCTAC ACCGCGATCG AGGCCGCCGA CGGCCCGTCC 
GGCCTCAAGG TGCTGCAATC GGACGTGCGC ATCGACCTCT TGGTGACCGA TGTCGGGCTG 
CCCGGCGGCA TGAACGGGCG TCAGGTGGCC GATGCGGGCC GCGTCCTGCG GCCGGAGCTG 
AAGGTGCTGT TCATCACCGG CTACGCCGAG AACGCGGCGG TGGGCAACGG CCACCTGGAG 
CCCGGCATGC AGGTCATCAC CAAGCCCTTC GTGATGGAGG TGCTGGCCGG GCGCATCAAG 
GAGATGATCA GTTCGGGGTG A 

 

Protein sequence

MTTAPSFLAG GGAAGALMRG LDWAATPLGP PETWPAALKT LVGVMLGSQQ PMLIVWGEAH 
VTLYNDGYAP MCGARHPKAL GRPFDEVWHD IWDQVEPILS RAYAGEATHM EDITFTMHRN 
GYPEETHFAF GYTPVRGEDG TVAGMFCACS ETTAAVRAGR QMQAERERFA RLFEQAPSFV 
AVLDGPHHVF AFANAAYRGL VAHRDILGKP VRAALPEVEG QGFFELLDEV YATGRSHTAH 
GAPVTLLRVP GGVPEQRFLD FVYQPMRDAS GTITGVFVDG SDVTERITGN AALAESEARF 
RTMADDAPVM MWVTDADGAC QYLNRRWYEF TGQTEAQALG LGWLEAVHPD DRGWSGETFL 
TANARHEGFS LEYRLRRRDG AYRWAIDTAS PRFAADGRFL GYIGSVVDIE ERRAAELALA 
ESEERLRLAV ESGEIGLWDF DPRAGTLFWP PRIKAMFGLA PEADVTLEDF SEGLHPDDRA 
RVTAAFAAAL DPGTRAFYDE EFRTVGGADG TIRWVAAKGR GVFDAEGHCL RGVGSAIDIT 
ARKATEERLV EATRRLDAVL DNATQAIFMM DERQHCAYMN RAAERLTGYT LEETRGQALH 
DVVHHTRPDG SPYPLHECPI DQAFPENNQE QGEEIFVHRD GSFYPVAFTA SPIRDEGGAP 
IGTVIEARNI EAELRAKAQL EAFNASLEQQ VAARTAELMR TEEALRQSQK MEAVGQLTGG 
LAHDFNNLLT GITGSLELLQ TRLAQGRLTE IDRYVNAAQG AAKRAAALTH RLLAFSRRQT 
LDPKPTDVNR LVMGMEELLR RTIGPSITLE VVAAGGLWSV LVDPSQLENA LLNLCINARD 
AMPDGGRITI ETANRWLDDR GARERDLDPG QYLSLCVTDT GTGMSPDVIA KAFDPFFTTK 
PIGQGTGLGL SMIYGFVRQS GGQVRIYSEV GQGTTMCLYL PRHYGAAEEP DPAPDLAAAP 
RAEQGETVLI VDDEPTVRML VTEVLEDLGY TAIEAADGPS GLKVLQSDVR IDLLVTDVGL 
PGGMNGRQVA DAGRVLRPEL KVLFITGYAE NAAVGNGHLE PGMQVITKPF VMEVLAGRIK 
EMISSG