Gene Mpop_4753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4753 
Symbol 
ID6310369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5077744 
End bp5079030 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content69% 
IMG OID642653432 
Productseryl-tRNA synthetase 
Protein accessionYP_001927384 
Protein GI188583939 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.287187 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGACA TCCGCGCCAT CCGCGAGAAT CCGGAGGCCT TCGACCGCGA CCTCGAACGC 
CGCGGCCTCT CGCCGCTCAG CGCCGAGCTG ATCGCCCTCG ACGATGCGCG CAAGGGCGCG
GTCTCGGCGG CGCAGGCAGC GCAGGAGCGG CGCAACGCCC TGTCGAAGGA GATCGGAGCC
GCCAAGAAGG CGAAGGACGA GGCCCGCGCC GCCGAGCTGA TGGCCGAGGT CGCCCGCCTC
AAGGAAGAGG CGCCAGGGCT GGACGCGGCG CAGGCGCAGG CGGCCAAGGT CCTCGACGAG
CGCCTCGCTG CGATCCCGAA TCAGCCGAAG GCCGACGTCC CCCTCGGCGC CGACGAGCAC
GGCAATGTCG AGTACCGCCG CTTCGATTCC TCCCGCGCGC GCCTTGCGGA AGGCCGCCAG
CATTTCGAGC TGGGCGAGGC CACTGGCCTG ATGGATTTCG AGGCCGCCGC GAAACTCTCC
GGCTCGCGCT TCGTGGTGTT GAAGGGTCCG CTCGCCCGGC TGGAGCGGGC GCTCGGCCAG
TTCATGCTCG ACCTGCACAC GGGCGAGCAT GGGTATACGG AAGTGGTGCC GCCGGTCCTC
GTGCGCGACG AGGCGATGTT CGGCACGGCA CAATTGCCGA AGTTCCGCGA CGATCAGTTC
GCGGCGGGCG ACGGCTTCTG GCTGATCCCG ACGGCCGAAG TGCCGCTCAC CAACCTCGTG
CGCGAAAACA TCCTGGCCGA GGACGAGCTT CCCCTGCGCT TCACCGCGCT CACCCCCTGC
TTCCGCGCCG AGGCCGGGGC GGCGGGGCGC GACACCCGCG GCATGCTGCG CCAGCACCAG
TTCAACAAGG TCGAGCTCGT CTCGATCACC GCGCCGGAAA AATCCGCGGA AGAGCACGAG
CGGATGCTCG CCTGCGCCGA GGCCGTGCTG CAAAAGCTCG ACCTGACCTA CCGCGTCATG
ACGCTCTGCA CCGGCGACAT GGGCTTTGCC TCCCAGAAGA CCTACGACAT CGAGGTCTGG
GTGCCGGGCC AGCAGACCTA TCGCGAGATC TCGTCCTGCT CGGTCTGCGG TGAGTTCCAG
GCGCGGCGGA TGAATGCGCG CTACCGGGCC AAGGAGGGCA GAGGGGTCGG CTTCGTCCAC
ACCCTCAACG GCTCGGGCGT CGCGGTCGGC CGCGCCCTGA TCGCCGTGAT GGAAAACTAC
CAGAACCCCG ACGGCAGCGT CACGATTCCG TCGGTGCTCC AGCCCTACAT GGGCGGCCTG
AACCGGATCG AGGGACCGAA CACCTGA
 
Protein sequence
MHDIRAIREN PEAFDRDLER RGLSPLSAEL IALDDARKGA VSAAQAAQER RNALSKEIGA 
AKKAKDEARA AELMAEVARL KEEAPGLDAA QAQAAKVLDE RLAAIPNQPK ADVPLGADEH
GNVEYRRFDS SRARLAEGRQ HFELGEATGL MDFEAAAKLS GSRFVVLKGP LARLERALGQ
FMLDLHTGEH GYTEVVPPVL VRDEAMFGTA QLPKFRDDQF AAGDGFWLIP TAEVPLTNLV
RENILAEDEL PLRFTALTPC FRAEAGAAGR DTRGMLRQHQ FNKVELVSIT APEKSAEEHE
RMLACAEAVL QKLDLTYRVM TLCTGDMGFA SQKTYDIEVW VPGQQTYREI SSCSVCGEFQ
ARRMNARYRA KEGRGVGFVH TLNGSGVAVG RALIAVMENY QNPDGSVTIP SVLQPYMGGL
NRIEGPNT