| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4744 |
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| Symbol | |
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| ID | 6313923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 5068849 |
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| End bp | 5069745 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 642653423 |
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| Product | Squalene/phytoene synthase |
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| Protein accession | YP_001927375 |
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| Protein GI | 188583930 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0251048 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCC CCGAGACCCG AACCGAGACG AGCCCCGAGG CCGGCCAGGG CGGGCTCGCC
TTCGCCTTTC GGCATTGCGA GGAGTTGGTG CGCGAGGGCG ATCCCGACCG CTACTTCGCG
ACGTTGTTCG CGCCGGCGGC CTTCCGGCCG CACCTGTTCG CACTCGCCGC CTTCAGCCTC
AGCATCGCCC GCGTCCGCGA GGCTGCCTCG AACCCGATGG CCGGCGAGAT CCGCCTGCAA
TGGTGGCGCG ATGCGCTCCA AGGGGAGGCG CGGGGCGATG TGCGGGCCAA CCCCGTCGCC
GCGGCCCTGG AGGACGCCAT CGTCACCCGC CGCCTCGGGC GCCAGCCCTT CGTCGATCTG
ATCGACGCCC GCGTCTTCGA CCTCTACGAC GATCCGATGC CGCGGGTGAA CGATCTCGAG
GGCTATTGCG GCGAGACCGC CTCCTCGCTG ATCCGCCTCT CCGGCCTCGT CCTCGCCGAC
GGCGCCGAAC CCGGCGGCGC GGCGGCCGCC GGCCATGCGG GCGTCGCCTA CGGCATCACC
GGCCTGTTGC GGGCCCTGCC CTGGCATGCG CGCCAGGGGC AGGTCTACCT GCCCGGCGAC
CTGCTGCGCC AGAACGGCGT CACCCGCGAG GACATCGTCT CGGGCCGCGG CGGGCCCGGA
CTCGTGCGCA CCTGCGCCGA ATTGCGGGCG CTGGCCCGGC GCCACCTCGC CGCCTGCGAG
GCGGCCCGTG CCACCATCGC CCCGGCGGCC CGGCCCGCCT TCCTGCCGAC GGCGTTGGTC
GAGCCCTATC TCGCGGCGAT GGAGCGGTCC GGCTACGACC CGCTCAACAG CGTGATCGAG
ATCCCCCGCT GGCGCCGCCT GTGGCGTCTG TGGCGGGCGG CGCGCACGGG GCGGTGA
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| Protein sequence | MTRPETRTET SPEAGQGGLA FAFRHCEELV REGDPDRYFA TLFAPAAFRP HLFALAAFSL
SIARVREAAS NPMAGEIRLQ WWRDALQGEA RGDVRANPVA AALEDAIVTR RLGRQPFVDL
IDARVFDLYD DPMPRVNDLE GYCGETASSL IRLSGLVLAD GAEPGGAAAA GHAGVAYGIT
GLLRALPWHA RQGQVYLPGD LLRQNGVTRE DIVSGRGGPG LVRTCAELRA LARRHLAACE
AARATIAPAA RPAFLPTALV EPYLAAMERS GYDPLNSVIE IPRWRRLWRL WRAARTGR
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