Gene Mpop_4725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4725 
Symbol 
ID6313591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5048958 
End bp5049263 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content68% 
IMG OID642653404 
Productsurface presentation of antigens (SPOA) protein 
Protein accessionYP_001927356 
Protein GI188583911 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.172687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0181493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGTCC TGGACGAATT GCAGGTCGAT CTCAAGGTCG TGCTGGGGCG CAGCCACATG 
CCGCTGCACA TGCTGCTGCG CATGGGCCGC GGCGCGGTGA TCGAGCTGGA GGCCACCGAG
ACCGACATGG TCGAGATCCT CGCCAACGAC CACCCGATCG CCCGCGGGCA GATTGTCGTG
ACCGGCAACC GGATCTCCGT CGAGGTGACC GAGCTGATCC GCAAGGCCGA GGTCGTGCGC
ACCCCCGGCG TGACCATCGG CGAAGGGGCC GTACCGATCC TCGACGACGG CGAGGGTGGG
CTCTGA
 
Protein sequence
MAVLDELQVD LKVVLGRSHM PLHMLLRMGR GAVIELEATE TDMVEILAND HPIARGQIVV 
TGNRISVEVT ELIRKAEVVR TPGVTIGEGA VPILDDGEGG L