Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_4724 |
Symbol | |
ID | 6313589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 5046783 |
End bp | 5047811 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642653402 |
Product | collagen triple helix repeat |
Protein accession | YP_001927355 |
Protein GI | 188583910 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01445] intein N-terminal splicing region |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.958299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.038222 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTAC CGATTACGTT CAACAACCAG ACTTACGGCG CTGGCTTTCT CGGCATCGAT GACGGAGGCG CATCCGCCGG CTTTTCGGTC GATGCTGCCT CCACGTACTC CGTTTCCGTC AACGGAACCG TCAACGCGGT GGGCGACACG GTCACCCTGA CCTATGGCGC TGACGCGCCG ACGGGCTATG CGGGTCGGTC CATTCAGCTG ACTTCGACGC AGTACGACAA CGCGAACCAG ATCCTGTTCA CCAGCAGGGA CATCCCTCCC GGTGAAACCA GCGTGGGGAA CTACCGCTAC CTTCTCTCGA ATACGCAGGT CTTCGGAAGC GGGAACCCCG CGCGGACGCG CTTCACGGCC GACGACAACA ATCTCGGCAC CTACAACGCC CAGGCCGCGC CCTGCTTCAC CACCGGCACG CTCATCCGCA CCGCCCGGGG CGAGGTCGCC GTCGAGGATC TGGTCGTCGG CGACCTCGCC GTGACCGCCT CCGGCGCGCT GCGCCCGATC ACCTGGATCG GCCGCCGCGA CGTCGATGGC CAAGGCCACG CCCTGTCCCA CGACCAGCAG CCCATCCGCA TCCGCGCGGG CGCCTTCGGG CCCGGCCTCC CGGCGCGCGA CCTGCGCCTC TCGCACGGCC ATCCGGTTCT CGTCGGCGCC GATGTCGACG GCGCGGGCGG AGCCCTGGTG CCGATCATGT GCCTGATCAA CGGCACCTCC GTCGTCCGCG AGGCGGCGAC CCGCGTCACC TACTGGCATG TCGAGCTGGA CAGCCACGAT ATCCTGCTGG CCGAGGGTCT GCCCGCCGAG AGCTTCTACG ACATGGGCAG CCGGGTCTGG TTCGCGGGCG ATGACGGCGC GCTGACCGAT CCGGACTTCG TGCCGGCCGG CGAGCACGGC CGCTGCCGCC CGGTGGCGGT GGATGGCAGC CTGATCGACC GGGAGCGGGC GCGGCTCGAC GGCGTCTTCG CCGCGGAACT CGACGCGCAC GGCGCCTGGA CCGACACGCC GGCGTGGATC GCCGCGTAA
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Protein sequence | MALPITFNNQ TYGAGFLGID DGGASAGFSV DAASTYSVSV NGTVNAVGDT VTLTYGADAP TGYAGRSIQL TSTQYDNANQ ILFTSRDIPP GETSVGNYRY LLSNTQVFGS GNPARTRFTA DDNNLGTYNA QAAPCFTTGT LIRTARGEVA VEDLVVGDLA VTASGALRPI TWIGRRDVDG QGHALSHDQQ PIRIRAGAFG PGLPARDLRL SHGHPVLVGA DVDGAGGALV PIMCLINGTS VVREAATRVT YWHVELDSHD ILLAEGLPAE SFYDMGSRVW FAGDDGALTD PDFVPAGEHG RCRPVAVDGS LIDRERARLD GVFAAELDAH GAWTDTPAWI AA
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