| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4721 |
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| Symbol | |
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| ID | 6313586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 5040353 |
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| End bp | 5043325 |
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| Gene Length | 2973 bp |
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| Protein Length | 990 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642653399 |
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| Product | D-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_001927352 |
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| Protein GI | 188583907 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00766177 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGAGCGCGA ATTCGGGCGC CAGCGCGAAG CCGGCTGAGG CACCGGCTCC GGCCCAGCGG
GCGAAGGCCC GCAACGATGC CGGGCTGCCG CGCAAGCTCG CCGAGGTCCT CCAGGGCGAG
GCCCGCTTCG ACGCCTTCAC CCGCGGGCGC TACGCGACCG ACGCCTCGAT CTACCAGATC
ATGCCGGCGG GCGTGGTGTT TCCCAGGAGC GCCGCCGACA TCGCCGCGAC CCTGAAGGTG
GCGGCCCAGT ACGACCTGCC GGTGATCCTG CGCGGCGGCG GCACCTCGCA GAACGGCCAG
CCGATCGGCT CCGGCCTCGT GGTCGATTGC TCGCGCCACT TCAACGGCGT GCTCGCCTAT
GACGCGGAGG CCGGCACGGT CACCGTCGAG CCCGGCCACG TGCTGGAGCG GCTCAACGCC
CGGCTGAGGG CGGACGGCTG GTTCTTCCCC GTCGAGCCCT CGACCGCCAC CCGCTGCACC
ATCGGCGGCA TGGCCGGCAA CAATTCCTGC GGCGCCCGCT CGCTGCGTTA CGGCAAGATG
AGCGACAACG TTCTCGGCAT GGAGGCGCTG TTCCACGATG GCGCCGCCTT CGGCTTCGGG
CTGACCGGCA ACGAGGCCAG CGCGGTCACC GGGGGCGCGC GGGCGGAGGA TCTGGCGCGG
CGGATGTTGG CGCTCGCCGA CGCCCACCGC GACGAGATCG CGGAGCGATA CCCGAAGGTC
CAGCGGCGGG TCGGCGGCTA CAACCTCGAC TCGCTGGTCG AGCCGCGGCC GAACCTCGCC
CATCTCCTCG TCGGCTCGGA GGGGACGCTC GCCGCCACCA CTTCGGTCAC GCTGAAGCTC
TCGCGCCTGC CGGCCCACCG CGCCATGGGC GTGTGCCACT TCCCTTCGTT CCGCGCGGCG
ATGGAGACCA CGCGCCACAT CGTGGCCCTC GATCCCGTGG CGGTCGAACT CGTCGACAAC
AACGTGCTCG TGCTCGGCGC CGACATCCCG CTGTTCCGCA CGACGCTCGC CGACATCACC
CGGGGCCAGC CGAACTGCCT GCTGCTGACT GAGTTCGCCG GCGACGATCT CGCCGCGCTC
AAGCGCGACC TGAAGCGCCT CGACCAGTGC ATGGCCGATC ACGGCTTTCC CGGCGCGGTG
GTCGAGGTGG TGGAGCCGAA CCGCCAGAAG GCGGTGTGGG AGGTGCGCGA GGCCTGCCTC
AACATCATGA TGTCGATGAA GGGCGACGCG AAGCCCGTTT CCTTCATCGA AGATTGCGCG
GTCCCCCTGG AGCATCTGGC CGACTACACC GACGCCGTCA CCGAGGTGTT TTCCAAGCAC
GGCACCCGCG GCACGTGGTA CGCCCACGCC TCGGTCGGCT GCCTGCACGT GCGCCCGATC
CTCGACATGA AGCAGGGCGG CGATGTCCGG AAGATGCGCG CCATCGCCGA GGAGACGGCG
GAGCTGGTGC GCCGCCACAA GGGCTCCTAT TCGGGCGAAC ACGGCGACGG CATCTCGCGC
TCCGAATTCG TGGAACCGCT GTTCGGCGCA AAACTCACCC GCGCCTTCGA GACCGTGAAG
GACGGCTTCG ACCCCAAGAA CCGCCTGAAC CCCAACAAGA TCGTCCGCCC GCTCAAGATG
GACGACCGCA CGCTGATGCG CTTCGCGCCC GATTACGCGG TGAGCACCCC GCGCAAGACG
GCGTTGGACT GGTCGGATTG GGGCGGCTTC GGCCCGGCGG TCGAGATGTG CAACAACAAC
GGCACCTGCC GGAAGCTCGC CGGGGGCGCG ATGTGTCCCT CCTACCGCGC CACCCGCGAC
GAGCAGCACC TCACCCGCGG CCGGGCCAAT TCCCTGCGCC TCGCGATCTC GGGCCAGCTC
GGCGCGGACG CGTTCGTCTC GCCCGAGATG AAGCGCACGA TGGATCTGTG CGTGTCGTGC
AAGGCCTGCC GCCGGGAATG CCCGACCGGC GTCGACATGG CCAAGATGAA GGTCGAGTTC
CTGCACCACT ACCACGCCCG GCACGGCCTG CCGCTGAAGG AGCGGCTGGT GGCCGAGATG
CCGCGCTATG CCGGCGTGGC CGCGGCGCTC GCGCCGCTCC TGAACCTGCG CAACCGCTAT
CCGGCGCTCG CCCGGTTCGG TGAGCAATGG GCCGGCTTCT CCGCCCGCCG CTCCCTGCCG
GAATGGCGCC GGCCCTGGCG CGAGACCGGC GAGGTCGCCC ACCCGGAGGA CGTGACGGGC
GACTTCCGCG ACCTCGTCCT GTTCGGCGAC ACCTTCAACC GCGCCTTCGA GCGCGAGAAT
CTGGAGGCCG CCGAGCGGGT GCTGCACGCT GCCGGCTACC GCCTGCACCG CGTCGTCGCG
CACAAAGGGC GCCGCCCGCT CTGCTGCGGG CGCACCTATC TCGCCTCCGG CCAGACCGAC
CGGGCGCGCG AGGAGGCGCG CCGCACGCTG GACACGCTGC TGCCCTTCGT GCGGGCCGGC
GCCCGGGTGG TGGGCCTGGA ACCCTCCTGC CTCCTGACCT TCCGCGACGA GTTCCTGTCG
TTGCTGCCGC GGGAGGAAGC GGGCGAGTTG GCTCGCAGCG CCCTCCTGTT CGAGGAACTG
CTCGCCGCCG ACCTCGCGGC CGGTCGCATC ACCCTCCCGC TCGCCGACCA GGGCGGCCGG
GTCGCCCATC TGCACGGCCA TTGCCACCAG AAGTCGTTCG GGGCGATGGG ATCGGTGGAG
ACGGTGCTGC GCGCGGTGCC GGGGCTCGAC GTGCGGGTGA TCGAATCGAG CTGCTGCGGC
ATGGCCGGCG CCTTCGGCTA CGGCCGGGAT ACGATCGACG TCTCCTTCGC CATGGCCGAG
CTGTCGCTGT TCCCGGCGCT CCGAAAGGCT TCCGCCGACG ATCTCGTGGT CGCCGACGGC
ACGAGTTGCC GCCATCAGAT CCATGACGGC CTCGGCCGCG ACGCGATCCA CGTCGCCCGC
GTGCTCGACG CGGCCCTCGT GCCCACGGCC TGA
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| Protein sequence | MSANSGASAK PAEAPAPAQR AKARNDAGLP RKLAEVLQGE ARFDAFTRGR YATDASIYQI
MPAGVVFPRS AADIAATLKV AAQYDLPVIL RGGGTSQNGQ PIGSGLVVDC SRHFNGVLAY
DAEAGTVTVE PGHVLERLNA RLRADGWFFP VEPSTATRCT IGGMAGNNSC GARSLRYGKM
SDNVLGMEAL FHDGAAFGFG LTGNEASAVT GGARAEDLAR RMLALADAHR DEIAERYPKV
QRRVGGYNLD SLVEPRPNLA HLLVGSEGTL AATTSVTLKL SRLPAHRAMG VCHFPSFRAA
METTRHIVAL DPVAVELVDN NVLVLGADIP LFRTTLADIT RGQPNCLLLT EFAGDDLAAL
KRDLKRLDQC MADHGFPGAV VEVVEPNRQK AVWEVREACL NIMMSMKGDA KPVSFIEDCA
VPLEHLADYT DAVTEVFSKH GTRGTWYAHA SVGCLHVRPI LDMKQGGDVR KMRAIAEETA
ELVRRHKGSY SGEHGDGISR SEFVEPLFGA KLTRAFETVK DGFDPKNRLN PNKIVRPLKM
DDRTLMRFAP DYAVSTPRKT ALDWSDWGGF GPAVEMCNNN GTCRKLAGGA MCPSYRATRD
EQHLTRGRAN SLRLAISGQL GADAFVSPEM KRTMDLCVSC KACRRECPTG VDMAKMKVEF
LHHYHARHGL PLKERLVAEM PRYAGVAAAL APLLNLRNRY PALARFGEQW AGFSARRSLP
EWRRPWRETG EVAHPEDVTG DFRDLVLFGD TFNRAFEREN LEAAERVLHA AGYRLHRVVA
HKGRRPLCCG RTYLASGQTD RAREEARRTL DTLLPFVRAG ARVVGLEPSC LLTFRDEFLS
LLPREEAGEL ARSALLFEEL LAADLAAGRI TLPLADQGGR VAHLHGHCHQ KSFGAMGSVE
TVLRAVPGLD VRVIESSCCG MAGAFGYGRD TIDVSFAMAE LSLFPALRKA SADDLVVADG
TSCRHQIHDG LGRDAIHVAR VLDAALVPTA
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