Gene Mpop_4708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4708 
Symbol 
ID6312497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5025967 
End bp5026743 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content71% 
IMG OID642653386 
ProductOrnithine carbamoyltransferase 
Protein accessionYP_001927339 
Protein GI188583894 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0199227 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTCT TCGCCCGCAT CGCGCTGAGT CTGGCGCTGG CCTTCCTCTA CGTGCCGATC 
GCGGTCCTGG TCGTCTATTC CTTCAACGCC TCGAAGCTCG TGACCGTCTG GGGCGGGTTC
TCCACCCAGT GGTACGGGGT GCTGTTCCGG GACGGCCCGC TGATCGCCGC GGCGCTCGTC
TCGCTCAAGG TCGCCGCGCT CTCGGCCACC ATCGCCGGTG TGCTCGGCAC CTGCGCGGCG
CTGGCGCTCG ACCGGCACGG GCGCTTCCGC GGGCGCGGCG CCTATACCGG GCTGCTCTAC
GCGCCGATGG TGATGCCGGA AGTCATCACC GGCCTGTCGC TGCTGCTGCT CTTCGTCGGC
ATCGGGCTGG ACCGGGGTAT CGCGACCCTC GTCATCGCAC ACGCGACCTT CGCCACGGGC
TTCGTCGCGG TGGTGGTGGG CGCCCGCCTG AAGGGGCTCG ACCGTTCCCT GGAGGAGGCC
GCCGCCGATC TCGGCGCGGC GCCGGCCCGC GTGTTCTTCG GCATCACCCT GCCGCTGATC
GCGCCCTCGG TCGCGGCCGG GTTCCTCCTC GCCTTCACCC TGTCGCTCGA CGACCTCGTG
ATCGCGAGCT TCGTCTCCGG CCCCGGCGCC ACGACCCTGC CGATGCGGAT CTACAGCCAG
GTCCGCCTCG GGGTGAATCC GGAGATCAAC GCCGCCTCGA CCCTGCTGAT CGCCGCCGTC
GGCCTCGTGG TGCTGACCGC CTCCTGGCTG ACGGGGCGAA AAGGGGCGGC GGTCTAG
 
Protein sequence
MSLFARIALS LALAFLYVPI AVLVVYSFNA SKLVTVWGGF STQWYGVLFR DGPLIAAALV 
SLKVAALSAT IAGVLGTCAA LALDRHGRFR GRGAYTGLLY APMVMPEVIT GLSLLLLFVG
IGLDRGIATL VIAHATFATG FVAVVVGARL KGLDRSLEEA AADLGAAPAR VFFGITLPLI
APSVAAGFLL AFTLSLDDLV IASFVSGPGA TTLPMRIYSQ VRLGVNPEIN AASTLLIAAV
GLVVLTASWL TGRKGAAV