| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4667 |
|---|
| Symbol | |
|---|
| ID | 6314156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 4982537 |
|---|
| End bp | 4983727 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 642653345 |
|---|
| Product | acyl-CoA dehydrogenase-like protein |
|---|
| Protein accession | YP_001927298 |
|---|
| Protein GI | 188583853 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0171462 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAGCG CCCTCGCTCT CCGGCCGGCG GACGATCGTA TGGCGGCCGC GCCGGATCAT
CCCGACTGGA CCCCCGACTG GACCGACGCG GCCGTCCTCG CCGCCACCCA GGCCATCGCC
GAAGGCCCCT TGAGCGCGGC GGCGGCCGGG ATCGACCGCG GCGCCTACCC GCTCGACCTC
CTCGGACGGC TCGGGGGCGC CGGGGCGCTC GGCGTCCATC TCGACCGCCA CGGCGCCCGC
CTCGGCCTGT CGATCGCCGC CATGCAGGCC GCGAGCCGAG CCTGCGGCGC CACCGGCTTC
CTGATGTGGT GTCACGACGT CTGCGGCCTC TATCTGGAGC AATCGGGCAA TCCGGCGCTC
TCCGGCGCGG TGCTCGACGC CCACGCCGCG GGGCGGACCT TCGGCGGCAC GGCGCTCTCC
AATCCCATGA AGGCGTTCGC CGGGATCGAA CCGATCCTCC TGCGCGCCCG CCGCGTCCCC
GGCGGCTACC GGGTGAGCGG CATGCTGCCC TGGGTCAGCC ATATCGGGCC GGGCCAGTAT
TGCGGCGCCA TCGCGGGCGT GGTCGGGGCC GGCGACACGA TCAGCCACGA GATCATGTTC
CTGCTGGCCT GCGACCGCGC CGAATTGCGG CCCTGCCCGC ATTTCTCCGG CATGGAGGGC
ACCAGTACCT GGGGCGTGCG CCTGGACGAC CTCTTCGTCG GACGCGACGA GATCATCGCC
GATCCGGCCC GCCCCCTCAT CGGCCGCATC CGCGGCGCCT TCATCCTGCT TCAGTGCGGC
ATGGGGCTGG GCGTCACCGA GGGCAGCCTC GACGCCATGC TGGCGGTCGA GGAGTCGCTC
GGCCACGTCA ACCAGTTCCT CGACGACCGC CCCGACGCCA TCGCGGCCGA ACTCGCCGAG
TTGCGCGCCC GCGTGATGCG CCTCGCCGAG ACGCCCTACG ACGGCTCGAC CGAGTACCTG
ATCGACGTCC TCGACGCCCG CGCCCAGACC TCGGAACTGG CCTTGCTCGC CTCGCAATCG
GCGCTGCTGC ACCAGGGCGC GCGGGGCTAC CTGATGTCGG CCGCGCCCCA GCGCCGCATC
CGCGAGGCGC ATTTCGTCGC CATCGTCACC CCGGCGATCA AGCATCTGCG CTGGGAGATG
GCGCGGCTGT CGCGGGAGAC GCTTCCCGCC TCCGAGGGAG GCCGGGCATG A
|
|---|
| Protein sequence | MPSALALRPA DDRMAAAPDH PDWTPDWTDA AVLAATQAIA EGPLSAAAAG IDRGAYPLDL
LGRLGGAGAL GVHLDRHGAR LGLSIAAMQA ASRACGATGF LMWCHDVCGL YLEQSGNPAL
SGAVLDAHAA GRTFGGTALS NPMKAFAGIE PILLRARRVP GGYRVSGMLP WVSHIGPGQY
CGAIAGVVGA GDTISHEIMF LLACDRAELR PCPHFSGMEG TSTWGVRLDD LFVGRDEIIA
DPARPLIGRI RGAFILLQCG MGLGVTEGSL DAMLAVEESL GHVNQFLDDR PDAIAAELAE
LRARVMRLAE TPYDGSTEYL IDVLDARAQT SELALLASQS ALLHQGARGY LMSAAPQRRI
REAHFVAIVT PAIKHLRWEM ARLSRETLPA SEGGRA
|
|---|
| |