Gene Mpop_4642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4642 
Symbol 
ID6310306 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4954807 
End bp4955564 
Gene Length758 bp 
Protein Length252 aa 
Translation table11 
GC content66% 
IMG OID642653320 
ProductTransposase and inactivated derivatives-like protein 
Protein accessionYP_001927273 
Protein GI188583828 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.555712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACT TGTTCTGGCT GTCGGACGAG CAGTGGGTGG TCATCGAACC GTTCATGCCC 
AAGAACCAGC CCGGGCCCGA ACGCAACGAC GACCGGCAGG TCATCTCCGG CATCATCCAC
GTCGTGAAGA CGGGCTGTCG CTGGTGCGAT TGCCCGTCGG AGTACGGTCC GCCCACCACG
ATCTACAACC GCTTCAATCG CTGGTCCCGG CGCGGCTTCT GGAAGGCGAT GCTGGTCGCC
CTGGCCAAGG CCGGATGGTC CGGCGAGGCC AACGCTATCG ACGCCACCTA CGTCAAAGCG
CACCGCTCCG CCCAGGGCGG AAAAGGGGGG CCAAGGCGCA AGACATCGGT CCCTCGCGCG
GCGGCCAGAC GACCAAGATC CACGCGCTCG TCGATGTCGT GGGCCGCCCG GCGGTCCTCC
TTCTGACACC CGGCAATGCC AGCGACGTGA GGACCGCACC GGATGTGCTG GCCGAGGCCC
CCGGCCGCAT CCGCCGCCTG ATTGCCGACA AGGGCTATGA CGCCAACTGG CTGCGAAAAG
ACCTGCGCGC GAGCAACACC ACACCGATCA TCCCCGGCAC CCGCGCGCGC AAGCGCAAGA
TCAGGCTCGA CAAGAAACGC TACCGCGAGC GCTGGCGGGT AGAGGCGACC TTCTGCCGAC
TGAAGGACTT CCGTAGGATT GCCACACGCT ACGACAAACT CGCCCGAAAC TTCGCCTCAG
CACTCGCCCT TGCCGCCGTC ATTGCCTTCT GGTGCTGA
 
Protein sequence
MADLFWLSDE QWVVIEPFMP KNQPGPERND DRQVISGIIH VVKTGCRWCD CPSEYGPPTT 
IYNRFNRWSR RGFWKAMLVA LAKAGWSGEA NAIDATYVKA HRSAQGGKGG AKAQDIGPSR
GGQTTKIHAL VDVVGRPAVL LLTPGNASDV RTAPDVLAEA PGRIRRLIAD KGYDANWLRK
DLRASNTTPI IPGTRARKRK IRLDKKRYRE RWRVEATFCR LKDFRRIATR YDKLARNFAS
ALALAAVIAF WC