| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4588 |
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| Symbol | |
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| ID | 6312657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 4897417 |
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| End bp | 4899174 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642653267 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001927220 |
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| Protein GI | 188583775 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.179057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCTG AGGCCGGCAC CCTCGCCGAG GCGCAGGCGC GCATCCGCGA ACTGGAAACG
CGGCTGGAGG AGGTCGAGGA CACCCTCGCG GCGATCCGCC GGGGCGATTT CGACGCCATC
GTGGTCGAGG GTCCGGCCGG CGAGCGGCTG GTCTACACCC TGGAGAATGC CGACCGGCCC
TACCGGGTGC TGATCGAGCA GATCCAGGAG GGCGCCTTCA CCCTCGGTCC GGACGGGACG
CTGCTCTACT GCAACCGCCG GCTCGCCGAG ACCCTGGGCA CCCCGCAGGA GCGCCTGATC
GGCCAGCCCT TCGCGCGTTT CGCCGCCAGG GACCAGGAGG CGACCCTCGC CGCCCTGGTC
GCCCAGGCGG CGCGGATGCC GGCGCGGGGC GAGATCGCCC TGTGCGACGA GGCGGGAATC
GAGCGCCCGG CCTATCTCTC CCTGAACCGC CTCGACGGCG ACGGCGACAC CCTGCTCCTG
TGCGGCGTGG TCACCGACCT CACCGCCGAG CGCCTGCGCC TGCACGAACT CGCCGAGGCC
AACGAGCGCC TGCGCGCCGA GGTGGCCGAG CGCGAGCGGA TCGAGGAGGC CCTGCGCCAG
AGCCAGAAGA TGGAGGCGGT GGGCCAGCTC ACCGGCGGCG TGGCGCACGA TTTCAACAAC
CTGCTGACCG TCATCAAGTC CTCCACCGAC CTGCTCAAGC GCCCCGACCT CGCCGAGGAG
CGCCGCCGCC GCTACGTCGA TGCCATCTCC GACACGGTGG CGCGCGCGGC CAAGCTGACG
GGCCAGCTCC TCGCCTTCGC CCGCCGCCAA GCCCTCAAGC CCGAGGTGTT CGATGCCGGC
CGCGGCGTCG CGTCGGTGGC CGACATGGTC GGCACGCTCA CCGGCGCGCG CATCCAGGTG
AAGACCCTGA TCGAGCCCTG TTTCGATGCG GCGGGCGAGC CCTTCGCCTG CCTCGTGGAG
GCCGATCCGA GCCAGTTCGA CACGGCACTC GTCAACATGG TCGTCAACGC CCGCGACGCC
ATGGACGGCG AGGGCACGCT GACCATCCGC GTCGGCCATG CCGGGCAGAT CCCGGCGCTG
CGCACCCATC CGGCGGTGCC GGGCGACTTC GTGGCCGTGT CGATCGCCGA CACCGGATCG
GGCATCGCGC CGGGCGACCT GTCGCGGATC TTCGAGCCGT TCTTCACCAC GAAGGGCGTC
GGCCAGGGCA CCGGGCTCGG CCTCTCCCAG GTGTTCGGCT TCGCCAAGCA ATCGGGCGGC
GACATCGCGG TGGAGAGCGT GCTGGGCCAA GGCACCACCT TCACCCTGTT CCTGCCCCGC
GCCAAGATCG CCCCGACCCT GAGGGAGGCC GCCGACGAGC CCGAGCCGCT GGCGCCCGGC
CACGGCACCT GCGTCCTGCT GGTGGAGGAC AATCGCGAGG TCGGCGCCTT CGCGACGCAG
GCGCTGACCG AGCTTGGCTA CGGCACCGTC TGGGCGATGG ATGCCGAGCA GGCGCTCGCC
GAACTCGGCC GTACGCCGGA GCGATTCGAC GTGGTGTTCA CCGACGTGGT GATGCCCGGC
ATGAACGGCG TCGAACTCGC CCGCACGATC CTGAGCCGGA CGCCCGACAT GCCGATCGTG
CTCTCCTCCG GCTACAGCCA CGTTCTGGCC GAGGACGGGC ACCACGGTTT CCCGTTGCTG
CACAAACCCT ACTCGGTGGA GGATCTCTCG CGCATCCTGC GCCGGGCCAT CCAGCGGCGC
AGCGCGCAGG GAAAATGA
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| Protein sequence | MSAEAGTLAE AQARIRELET RLEEVEDTLA AIRRGDFDAI VVEGPAGERL VYTLENADRP
YRVLIEQIQE GAFTLGPDGT LLYCNRRLAE TLGTPQERLI GQPFARFAAR DQEATLAALV
AQAARMPARG EIALCDEAGI ERPAYLSLNR LDGDGDTLLL CGVVTDLTAE RLRLHELAEA
NERLRAEVAE RERIEEALRQ SQKMEAVGQL TGGVAHDFNN LLTVIKSSTD LLKRPDLAEE
RRRRYVDAIS DTVARAAKLT GQLLAFARRQ ALKPEVFDAG RGVASVADMV GTLTGARIQV
KTLIEPCFDA AGEPFACLVE ADPSQFDTAL VNMVVNARDA MDGEGTLTIR VGHAGQIPAL
RTHPAVPGDF VAVSIADTGS GIAPGDLSRI FEPFFTTKGV GQGTGLGLSQ VFGFAKQSGG
DIAVESVLGQ GTTFTLFLPR AKIAPTLREA ADEPEPLAPG HGTCVLLVED NREVGAFATQ
ALTELGYGTV WAMDAEQALA ELGRTPERFD VVFTDVVMPG MNGVELARTI LSRTPDMPIV
LSSGYSHVLA EDGHHGFPLL HKPYSVEDLS RILRRAIQRR SAQGK
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