Gene Mpop_4580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4580 
Symbol 
ID6312680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4888514 
End bp4890004 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content74% 
IMG OID642653259 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001927212 
Protein GI188583767 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.730418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACAGA CCGAACCGGC GGCGATCGCC GCCCTGCCCT GGCACAGCGA GGCAACCGCC 
GCGACGGCGC GCGCGCGTTC GCCCGGCCGG CTCGGCCTGT CCGGCCGCCT GTTCCTGCTC
ACGGTGGCCT TCGTCGTCCT GGCCGAGATC CTGATCTACA TCCCGGCCGT GGCGACCTAC
CGGTTGTCGC GGCTCTCCGA CCGGGTCGCG GCGGCCCGGG TCGCCGCCCT CGTGCTCAAT
GCCGCCCCCG AGGGGAGGGT CCCCGAGGAG ACCGCCCGGC GTCTGCTGAT GGGGGTGGGC
GCCCGCGCCA TCGCCGTGCG GGTCGGCGAG ACGTGGCGCT ATCTCACTGA CGGTCCGGTG
CCGTCCGTGG TCGCCGAGAC GGTGGACCTG CGGGAGCGTC GCCTGACGGG CTCGGTCAGC
GGCGCCTTCC GGACGCTGTT CCTCCACACC GATGCGCCGA TCCGGGCGAT CGGACCGGGG
CAGGACGGCT TCGACGCCGT CGAAGTCCTG CTCGACGAGG CGCCGCTGCA GGCGGCTCTG
GCGGATTTCT CGCTCCGCCT GCTCACCGCC TGCCTCATCA TCGCGGCGCT GGCGGCCGGG
CTCGTGTTCT TCGTGCTCCA GCGGGCGATC GTGCGGCCGG TGGTCCGGCT CGCCCGCGAC
ATCGCCGTCT TCGCCGACGA TCCCGAGCGG ACCGACCTCG TGGCCCGGCG CTCGGCGCGC
AGCGACGAGA TCGGGCAGGC GGAGAACGCC CTCGCCCGGA TGCAGGTCGC GCTCGGCGGC
GAGCTGCGTC AGCGGCGGCG GCTGGCCGAA CTCGGCCTCT CGGTGAGCAA GATCAACCAC
GAACTGCGCA ACCTGCTCAC CACCGCCCAG CTCCTCGGCG ACCGGCTCGA AAGCGTCTCC
GACCCCCTGG TGCAGCGCGT CGCGCCGCGC CTCGTGGAGA CCCTCGACCG GGCGATCCGC
TTCTGCGAGG CGACGCTCGC CTACGGCCGC GCCACGGAGC CGAACCCGCA GCGCCGCATG
GTGGCCCTCG GTCCCCTCCT CGAGGAACTG ACCGACCTCG CCGACCTGAT GCCCGCCGCC
CGCATCCGCG TGGAGACCCG CGCGGCGCCG GATCTGGAGA TCGATGTCGA TCCCGAACAG
CTCCTGCGGG CGCTGACCAA CCTCGTGCGC AACGCGGTGC AGGCCCATGC CGCGGCCCGG
ACCGAGGACG GCCGGGTGCT GATCGAGGGC GTCCGCAGCG GCGCGTCCGG CGGGGGGGCG
GTCACGATCC TCGTGACCGA CAACGGCCCC GGCGTGCCGG ATCGGGCCAA GGCCAACCTG
TTCGCCGCCT TCCAGGGCTC GACCCGGGCC GGCGGCACGG GGCTGGGCCT CGCCATCGCC
TCGGAACTGG TGCGCCTCAA CGGCGGCACT CTCTGCCTCG ACGAGACGGC GGGCGGTGCG
CGCTTCCGCA TCGTCATCCC GGACCGCGCC GCGGGGGTGA AGGCGGCGTG A
 
Protein sequence
MAQTEPAAIA ALPWHSEATA ATARARSPGR LGLSGRLFLL TVAFVVLAEI LIYIPAVATY 
RLSRLSDRVA AARVAALVLN AAPEGRVPEE TARRLLMGVG ARAIAVRVGE TWRYLTDGPV
PSVVAETVDL RERRLTGSVS GAFRTLFLHT DAPIRAIGPG QDGFDAVEVL LDEAPLQAAL
ADFSLRLLTA CLIIAALAAG LVFFVLQRAI VRPVVRLARD IAVFADDPER TDLVARRSAR
SDEIGQAENA LARMQVALGG ELRQRRRLAE LGLSVSKINH ELRNLLTTAQ LLGDRLESVS
DPLVQRVAPR LVETLDRAIR FCEATLAYGR ATEPNPQRRM VALGPLLEEL TDLADLMPAA
RIRVETRAAP DLEIDVDPEQ LLRALTNLVR NAVQAHAAAR TEDGRVLIEG VRSGASGGGA
VTILVTDNGP GVPDRAKANL FAAFQGSTRA GGTGLGLAIA SELVRLNGGT LCLDETAGGA
RFRIVIPDRA AGVKAA