| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4579 |
|---|
| Symbol | |
|---|
| ID | 6312679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 4887542 |
|---|
| End bp | 4888339 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642653258 |
|---|
| Product | SNARE associated Golgi protein |
|---|
| Protein accession | YP_001927211 |
|---|
| Protein GI | 188583766 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0398] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.300931 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.641108 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGGCG ACCGGGACGG CGATGCCGGG CCGCCGGGCC CGCGCCGCCC CTGGCTGCGC
TGGCTCCCGC TGCTCGTGCT GGCCGCGCTC TCTATCGGCA TCCTCGCCGC GGGCGGCACC
CGCTTCCTCG ATCTCGACCG GCTCTCCGAG TCGCGGGTCT GGCTCCAGGG GCTGATCGCC
GAGGACCGGG TGCGGGCGAT CGCGCTCGCC TGCCTCGCCT ATGTCGGCTC GGTGGTGGTC
TCGCTGCCCG CGACCCTGGT GCTCACGGTG CTGGCCGGGC TGCTGTTCGG CCCGGTGACG
GGGGCCCTGA TCGCCATCGC CTCCTCCACG ATGGGAGCCT CGATCGTGTT CTCCGTCGGG
CGCTACGCCG CCGGCGACCT GATCCGGCGC AAGGCCGGTC CCCGGCTCGG GCGCTTCGCC
GACGGGTTCC GCCGCGAGGG CTTCGGCTAC ATCCTGATCC TGCGGCTCCT GCCGATCTTC
CCCTACTGGA TCACCAACCT CGCCCCGGCG GCCTTCGGCG TGTCGCTGCG TACCTTCGCG
CTCGCCACCC TGCTCGGTCT CACCCCGGGC GCCTTCATCT ATGCCGGGCT CGGGGCCGGC
CTTGAGGATC TCCTGAGCGC ACGCGACGAG GCCAAGGCCG CCTGCCTTTC CGCCGGGGGC
ACCGATTGCG CGGAGGGCAT CGACCTGCGC GCGCTGGTGA CGCCCGGCAT GGTGGCGGCG
CTGGCGGCTT TGGCCGGTTT TGCTCTTTTG ACGGTTTATC TGCGCCGACG GCTTGAGCGG
CGGACGCTTC GCGCATAA
|
|---|
| Protein sequence | MQGDRDGDAG PPGPRRPWLR WLPLLVLAAL SIGILAAGGT RFLDLDRLSE SRVWLQGLIA
EDRVRAIALA CLAYVGSVVV SLPATLVLTV LAGLLFGPVT GALIAIASST MGASIVFSVG
RYAAGDLIRR KAGPRLGRFA DGFRREGFGY ILILRLLPIF PYWITNLAPA AFGVSLRTFA
LATLLGLTPG AFIYAGLGAG LEDLLSARDE AKAACLSAGG TDCAEGIDLR ALVTPGMVAA
LAALAGFALL TVYLRRRLER RTLRA
|
|---|
| |