| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4573 |
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| Symbol | fliF |
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| ID | 6312673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 4880747 |
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| End bp | 4882363 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642653253 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_001927206 |
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| Protein GI | 188583761 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.628076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.449535 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACCCA TCCTCGATCT GGTGACGAAG CTCGGGCCCG CGCGCATCGC CGCGATGGCG
GCCGTGACGC TGACGCTGGT CGGCTTCTTC GCCTTCGTGA TCCTGCGGGT TTCGCGGCCC
GACATGGGCG TGCTGTTCTC CGACCTGTCG ATGCAGGATT CCTCCGCAGT GATCCGCGAG
CTCGACGCGC GCGGCATCGC CTACGAGACC AAGGGCGAGC TGGGCCAGAC CGTGCTGGCG
CCCCGCGCCG ATCTGGCCAA GCTGCGGATG GACTTCGCCG GCAAGGGCCT GCCCGCTCAG
GGCGGCATCG GCTACGAGAT CTTCGACAAG GGCGACGCCT TCTCCTCGAC GAGCTTCGTC
CAGAACGTGA ACCACCTGCG GGCGATGGAG GGCGAGCTCG CCCGCTCGAT CCGCGCCATC
GGCCGGGTCC AGGCGGCCCG CGTCCACCTC GTCATCCCCG AACGCCGCCT GTTCGAGCGC
GACCGCGAGG CGCCCTCGGC GGCCATCGTG GTCAAGCTGA TGGGCGATCT CGACCCGAGC
CAGGTGCGGG CGATCCGGCA TCTGGCCGCC TCCGCGGTCG AGGGGCTGAA GCCCGAGCGG
GTCTCGATCG TCGACGAGCG CGGCCGGCTG CTCGCCGACG GCGCCCGCGG CGCCGAGGCG
GAAGGGGCGG GCGCCCTGGA GGAGCGGCAG GCCGGCATCG AGCGGCGGAT GCGCGCGCAG
ATCGAGGAGA TCGTGGCCGG CATCGTCGGC CAGGGCCGCG CCCGGGTGCA GGTCACCGCC
GAACTCGACC TCAACCGGGT CGAGAGCCGC TCGGAGAGCT TCGACCCCGA GAGCCGCGTC
GTCCGTTCCA CCCAGACCCG CTCGGAGAAT TCGCTGACCG GCGGGGCGGA GGGGCAGGTC
AGCGTCGGCA ACGAATTGCC CGGCGCCAAC CAGAACCAGC CCCCGCCCCA GCAGAAGGAT
TCCTCGCAGA AGAACGAGGA GGTCACGAAT TACGAGATCT CCCGCGTCAC CAAGGTCGAG
ACCCTGGAGG GCGGGCGCCT CAAGCGCCTC TCGGTGGCGG TGCTGGTCGA TGGCGTCTAC
GCCCCCGGCG CCGACGGCAA GGCCGCCTAC CAGCCCCGCT CCGATGCCGA GATCGCGCGC
ATCGCCGCGC TGGTGCGCAC CGCGGTCGGC TACGACAAGG CCCGCGGCGA TCAGGTCGAG
GTGGTCAATC TGCGCTTCGC CGAGACGCCC GCCGCCGCCG AATTCGCCGA GCCCGGCCTG
ATCCAGTCGT TCCTGAGCCC GAGCAAGGAG GACGTGATGC GCCTCGTGGA ACTCGCGGTG
CTGAGCCTGC TCACCCTGAT CGTGCTGATG GCGGTGGTGC GTCCGCTCCT GCGCCGCGTG
CTCGAATCGG ACGCGCCGGT GGCGGCGCTC GCCGGCCCGG CGCTGGCGCT GGCCGGGGCG
GGCGGCGAGG GGCCGACCGA GATCGCGGTG CGCGAGAACA GCACCAACAA GTTCCTCGAA
TCGGCGAAGA TCAACGGCCA GATCCAGGCC GAGACGGTGG AGCGCGTGGT CGACATGGTG
CGGGCGAGCC CGACCGAGAC GGTCGAGGTG CTGCGCAACT GGATCCACGA TTCCTGA
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| Protein sequence | MKPILDLVTK LGPARIAAMA AVTLTLVGFF AFVILRVSRP DMGVLFSDLS MQDSSAVIRE
LDARGIAYET KGELGQTVLA PRADLAKLRM DFAGKGLPAQ GGIGYEIFDK GDAFSSTSFV
QNVNHLRAME GELARSIRAI GRVQAARVHL VIPERRLFER DREAPSAAIV VKLMGDLDPS
QVRAIRHLAA SAVEGLKPER VSIVDERGRL LADGARGAEA EGAGALEERQ AGIERRMRAQ
IEEIVAGIVG QGRARVQVTA ELDLNRVESR SESFDPESRV VRSTQTRSEN SLTGGAEGQV
SVGNELPGAN QNQPPPQQKD SSQKNEEVTN YEISRVTKVE TLEGGRLKRL SVAVLVDGVY
APGADGKAAY QPRSDAEIAR IAALVRTAVG YDKARGDQVE VVNLRFAETP AAAEFAEPGL
IQSFLSPSKE DVMRLVELAV LSLLTLIVLM AVVRPLLRRV LESDAPVAAL AGPALALAGA
GGEGPTEIAV RENSTNKFLE SAKINGQIQA ETVERVVDMV RASPTETVEV LRNWIHDS
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