Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_4533 |
Symbol | |
ID | 6309056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 4838941 |
End bp | 4841298 |
Gene Length | 2358 bp |
Protein Length | 785 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 642653213 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_001927166 |
Protein GI | 188583721 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.955834 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCGTGA GTCTTCCCAC CGCCGAGGAA CCGAGCGTCG AACCGGCGCG CTTCCGGATC GCGGAACCGT TGCGGGCGGC GCAGGAAGCG CTCGCCCGGG CGCAGGACGC CGCCGGCATC GGCGTGTTCA CCCTCGACCT GCGCGAGGGC CTGCTGCATC CGAGCCCGGC CTTCTGCCGG CTGCACGGCC TGGAGCCGCG CGAGCACTAT CCCCTCGCCG CCCTTGCCGA GCGGCTCGCG GCGGAGGACG CGGCGGCGAT CCCATCGGGC GATGCACCGC CCGGCGAGAC GTTCTACCGC GTCCGCGATC CGCTGACCGG CGCCCTGCGC TGGATCGCCC GCACCCTCGA GATCGAGTGC GACGTGTACG GCAAGGCCGC GCGCCTGTTC GGCGTGGTGC GGGACGTGAC CGAGCAGCGG GCCCAGCGCA CGACGCTGGC CGAGAGCGAG CAGCACTACC GCACGCTGTT CGAGCAGATG GACGAGGGCT ACTGCGTCAT CGAGTTCATC GACGGCCCGC ACGGCCCCCT GAGCGACTAC GTCCACGTCA CCGCCAACCG CGCCTATGCG CAGCATGCCG GCATCGAGAG CGTCGCCGGC AAGCGCCTGC GCGAGATCGT GGGCGAGGAG GCCGAGGGCT GGCTCGCGCT CTACGGCGAC GTCCTGCGCA CCGGCCGGCC GATCCGCTTC CAGCGCGAGC TGGTCGCCAC GGGCCGCTAC CTCGAACTGG CCGCCTTCCG CATCGAGCCT GCATCCCGGC GCCAGGTCGC GGTGCTGTTC CAGGACATCA CCGCGCGCCG CCGCGTGGAA CACCTGCTCC ATTCCAAGGC CGCCGACCTG GAGGCGGAGG TGGTGGCGCA ACGGCGCGAC CGCGACCGCG TCTGGACCCT CTCGCCGGTG CTCAAGGTCG TGACCACTCC CGATGGGCGG ATCGAGGCGG TGAACCCGTC CTGGAGCCGG ACGCTGGGCT GGTCGGCGGG CGAGACGGTG GGCCGGCACG TGCCCGACTT CTTCGTCCCC GAGGAGCGTG CGGCGGCCGA GGCGGCGCTG GAGCGGCTCG CGGCCGGCGG CTCGACCGAT CTCGAACTGA CCTGCCTCAC CAAGGATGGC GGCGCCCGCC GGGTGCTCTG GACCATCGTG CCCGCCGACG GCCTGCTCTA CGGCTTCGGC CGCGACATCA CCGAGCAGCG GCAGGCCGAG GAGGCGCTGC GCCAGTCGCA GAAGCTGGAG GCGGTGGGCC AGCTCACCGG GGGCGTGGCC CACGACTTCA ACAACCTGCT GACCATCATC CGCTCCTCGG TGGAGTTTCT GCGAAGGCCC GACCTCGCGC CCGAGCGCAA GGCGCGCTAC CTCGACGCCG TTTCCGACAC CGTGGACCGC GCCGCCAAGC TGACGGGCCA GCTCCTGGCC TTCGCCCGGC GGCAGGCGCT CAAGCCCGAG ACCTTCGACG TGGGCGAGCG GCTGCGCAGC ATCTCGGAAA TGCTCGATTC GGTGACGGGG GCGCGCATCC GCGTCGTCAC CGACCTGCCC GGCGCCCCCT GCTTCGTGCG CGCCGATGCC AGCCAGTTCG AGACGGCGCT CGTCAACATG GCGGTGAACG CCCGCGACGC CATGGACGGG GAGGGCTGCC TGACGCTGCG CCTCGACGGG ACCGCACCGA TGCCGCCGAT CCGCGGCCAT GCCGGTGCCG CCGGGCCCTT CGTCGCAGTC TCGGTCGTCG ACACCGGCAC CGGTATCGCG AGCGCTGACC TGACCCGCAT CTTCGAGCCG TTCTTCACCA CCAAGGAGGT GGGACGGGGC ACGGGGCTCG GCCTCTCCCA GGTGATCGGC TTCGCCAAGC AATCGGGCGG CGACGTGGAC GTGAAGAGCC GCGCGGGCGA GGGCACGACC TTCACTCTCT ACCTGCCCGA GGTCGCCGCC CCCCTGGCGG CCCCCGCCCC CGCCGGACCG GGGCCGGATC CGGGCACCGC GGCGCATCTG CGAATCCTCG TGGTCGAGGA CAACCTCGAA GTCGGCCGCT TCTGCACGCA GATCCTGGAG GAACTCGGCC ACCGCCCGGT CTGGGCCGAG AACGCCGAGG CCGCCCTGGT CGAGCTGGAG CGGGCCGCGC CGCCCTTCGA CGCGGTCTTT TCCGACGTGG TGATGCCGGG TATGGGCGGC ATCGCGCTCG CCCGCATCCT GCGCGAACGC CTGCCGGATC TGCCGGTGGT GCTCACCTCC GGCTACAGCC ACGTCCTGGC GCAGGACGAC GCGCACGGGT TCGAGCTGCT GCGCAAGCCG TATTCGGCGG AGGAGCTGGG GCGGGTGCTG CGTGAGATGG CGGGGCGGCG GGGGACGCGG GACGCGATGC CGGCCTGA
|
Protein sequence | MLVSLPTAEE PSVEPARFRI AEPLRAAQEA LARAQDAAGI GVFTLDLREG LLHPSPAFCR LHGLEPREHY PLAALAERLA AEDAAAIPSG DAPPGETFYR VRDPLTGALR WIARTLEIEC DVYGKAARLF GVVRDVTEQR AQRTTLAESE QHYRTLFEQM DEGYCVIEFI DGPHGPLSDY VHVTANRAYA QHAGIESVAG KRLREIVGEE AEGWLALYGD VLRTGRPIRF QRELVATGRY LELAAFRIEP ASRRQVAVLF QDITARRRVE HLLHSKAADL EAEVVAQRRD RDRVWTLSPV LKVVTTPDGR IEAVNPSWSR TLGWSAGETV GRHVPDFFVP EERAAAEAAL ERLAAGGSTD LELTCLTKDG GARRVLWTIV PADGLLYGFG RDITEQRQAE EALRQSQKLE AVGQLTGGVA HDFNNLLTII RSSVEFLRRP DLAPERKARY LDAVSDTVDR AAKLTGQLLA FARRQALKPE TFDVGERLRS ISEMLDSVTG ARIRVVTDLP GAPCFVRADA SQFETALVNM AVNARDAMDG EGCLTLRLDG TAPMPPIRGH AGAAGPFVAV SVVDTGTGIA SADLTRIFEP FFTTKEVGRG TGLGLSQVIG FAKQSGGDVD VKSRAGEGTT FTLYLPEVAA PLAAPAPAGP GPDPGTAAHL RILVVEDNLE VGRFCTQILE ELGHRPVWAE NAEAALVELE RAAPPFDAVF SDVVMPGMGG IALARILRER LPDLPVVLTS GYSHVLAQDD AHGFELLRKP YSAEELGRVL REMAGRRGTR DAMPA
|
| |