Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_4514 |
Symbol | |
ID | 6309694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 4814754 |
End bp | 4816478 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 642653194 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_001927147 |
Protein GI | 188583702 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.221149 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGGGC CGCCCACGCG GGGTGGCCTT AACGGAACGC TGTCCGGCCG CATGTCCGCC CTCGCCGCCC CGTCGCCTCC GGCCACCCCG TCGTTCGCGG CGGCGCTGGC CGAGATGGCC GTCCCGCTTC TCCTGCTCGA CGCCGCCGGC ACGATCACCT TCGCCAATGC CTGCGCGGCG GCGCTGCTCG CCTGCCCCGC GCCGGCCGGC CTTCCCCTCC CCGCTCTGCT GGCGGCCTGC GGTGCCGCGG AGCCGGAGGG CGGCATCCTT CCGGAGGCGC TGCGCGCTGC GCGGCCCGTC CGGTCGCGCC TCACCCTCGG CGACCGCCTC GTGGAGGCCG CGCTGGCGCC GCTCTCGTCC GGCGGCTTCG CCCTCACCTT CGAAGACGTG ACCGAGTTGC TGCGCGGCGC GGCTCTGGCG CGGCAGGAGC CGCTCACCGG CCTGTGCAAC CGCGTCGGCC TGCACGACCG CCTCGACGCG GCGCTGGCCG AGGCCGCCCG GACGGACGCG CCGCTCGCGG TGCTGATGCT CGACCTCGAC CGGTTCAAGG CGGTCAACGA CACCCTCGGC CACCCGGTCG GCGACGCGCT CCTGCGCAAG GTCGCCGAGC GCCTGCGCAA GGCCACCCGC AGCGGGGACG TCGTGGCGCG GCTCGGCGGC GACGAATTCG CCATCATCCA AGGCGGGCCC TCCTCCGGCG CCGAGCAGCC GCAGGCGGCC GAAGCCCTGG CGCGCCGCCT CGTCGATCTC GTCGGGCGCA CCTACGTCGT CGACGGCCAC ATGCTCAATG TCGGCGTCAG CGTCGGCGTC GCGCTCAGTC CCGCCGACGG GCGCAACGCC GACGACCTCC TGAAGCATGC CGACCTCGCC CTCTACCGGG CCAAGGCCGA GGGCCGGGGC ACCCACCGCT TCTTCGAGCC GGCGATGAAC GCGCAGATGC AGGCGCGCCG CAGCCTCGAG ATCGACCTGC GCCGGGCGCT CGCCCTCAAG CAGTTCGACC TCGCCTTCCA GCCGCAGATC CAGCTCGAAA CGGGGCAGAT CGTGGGCTTC GAGGCGCTGC TGCGCTGGAA CCATCCCGAG CGCGGCCCGG TCTCGCCCGC CCTGTTCATT CCGCTGGCCG AGGAGATCGG CCTCATCGTC GGCATCGGCG AATGGGCCCT GCGCACCGCC TGCCGCGAGG CGGCGGGCTG GACGCAGCCC GCCTCGATCG CCGTGAACCT GTCTCCGGTG CAGTTCCGCG GCGGCCGGCT GGTCGAGACC GTGATGCACG TGCTCGCCCA GACCGGCCTC GACCCGGCCC GGCTGGAACT GGAGATCACC GAAGGCGCGC TCTTGGAGAA CACGGACAGC GTGCTCGACG TGCTGAACGG CCTGCGCGCG CTGGGCGTGA AAATCTCGAT GGACGATTTC GGCACCGGCT ACTCCTCCCT GAGCTACCTG CAGAAATTCC CCTTCGACAA GATCAAGATC GACCAATCCT TCGTCCGCGG CATGGAGGGC AATGCCGAGT GCGGGGCGAT CGTGCGGGCC ATCGCCCGGC TCGGCGCCAG CCTCGGCATG CGCACCACCG CGGAAGGGGT CGAGACCGCG ACGCAGCTCG ACGCCATCCG CGCCGAGGGC TGCACCGAGG TCCAGGGCTA CCTGACCGGG CGTCCGATGC CCGCCGCCCA GGCCGCCGCC CTGCTCATTC CCTCCCCCGC CGCCCTTCCC GCCGACGCCG CCTGA
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Protein sequence | MEGPPTRGGL NGTLSGRMSA LAAPSPPATP SFAAALAEMA VPLLLLDAAG TITFANACAA ALLACPAPAG LPLPALLAAC GAAEPEGGIL PEALRAARPV RSRLTLGDRL VEAALAPLSS GGFALTFEDV TELLRGAALA RQEPLTGLCN RVGLHDRLDA ALAEAARTDA PLAVLMLDLD RFKAVNDTLG HPVGDALLRK VAERLRKATR SGDVVARLGG DEFAIIQGGP SSGAEQPQAA EALARRLVDL VGRTYVVDGH MLNVGVSVGV ALSPADGRNA DDLLKHADLA LYRAKAEGRG THRFFEPAMN AQMQARRSLE IDLRRALALK QFDLAFQPQI QLETGQIVGF EALLRWNHPE RGPVSPALFI PLAEEIGLIV GIGEWALRTA CREAAGWTQP ASIAVNLSPV QFRGGRLVET VMHVLAQTGL DPARLELEIT EGALLENTDS VLDVLNGLRA LGVKISMDDF GTGYSSLSYL QKFPFDKIKI DQSFVRGMEG NAECGAIVRA IARLGASLGM RTTAEGVETA TQLDAIRAEG CTEVQGYLTG RPMPAAQAAA LLIPSPAALP ADAA
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